Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1511 ATGAATTCCAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTCGAATTCAAGATTGTATTGCAGAAGGTTTCGTTGCGCCTTACTGACTTGGAGGCAACTTTGGATGCAAGTCCTTTTACTTTTGATACTGCTGCTCGTGATCAAACAAGAGAGAGCATCAATGAGTTCTTGGAAAGTGTTAAAAGCCATGATCTAGCAAAAGCTGAGATTCTCAACATAATCAACATCAGGCCCACTAACATAGTCGAAATTTTTTCGTGTTGTGATACTCGTTTTTCGGATGAAGAGCTCACAGAAATAGTTGAGATTGTGAAGAGAACATTGCCACCACCCCCTGAAGATGCCAATGGTGCTGAAGCAACAAAATCAAATGGTGAGAAAGGTAGGGAACAAATGGAAACAAGTTGA 414 0.4034 MNSNSDKLRQSYNELLEFKIVLQKVSLRLTDLEATLDASPFTFDTAARDQTRESINEFLESVKSHDLAKAEILNIINIRPTNIVEIFSCCDTRFSDEELTEIVEIVKRTLPPPPEDANGAEATKSNGEKGREQMETS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1511 137 Gene3D - 2 108 IPR038324 -
Ahy2g1511 137 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 43 129 IPR038846 GO:0005666|GO:0006384
Ahy2g1511 137 SMART rpol4neu2 5 113 IPR006590 -
Ahy2g1511 137 SUPERFAMILY HRDC-like 44 111 IPR010997 GO:0000166|GO:0044237
Ahy2g1511 137 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC9 43 129 - -
Ahy2g1511 137 MobiDBLite consensus disorder prediction 109 137 - -
Ahy2g1511 137 Pfam RNA polymerase Rpb4 45 109 IPR005574 GO:0006352|GO:0030880
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1511 Ahy-Chr2 80505789 80507147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1511 1 26 Primary Pumps ATPases(2) AT2G28520 84.615 2.97e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1511 K25304 - adu:107474914 269.24