Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1482 ATGCATAGTCTTCAGAAGCAACGAAGTTTATTATTTCAGTACCTGCGTTCATCATCAAACAGCAACAATATTATTCATAATTCAAAAATGATTCTTTCATCTTCTTCTTCTTTATTATTAGCCTCTAACTTTTCTTCCACTGCAGGCAAGGTCATTCCTTGCAAAGCTGCAGTTGCATGGGAAGCAGGGAAGCCATTGGTGATTGAAGATGTGGAGGTTGCTCCACCACAAGCCAAAGAAGTAAGGATTAACATCAAATATTCATCACTTTGCCACACTGATTTATATTTCTGGGAATCTAAGAGCGTACCACCAGTATTTCCACGCATATTAGGACACGAAGCATCTGGGGTTGTGGAGAGTGTAGGTGATGGTGTATCAAATCTCAAGCCTGGTGATCATGTTCTTCCACTATTCACTGGAGAGTGTGGGGAATGCCCAAACTGCAAGTGTGAAGATAGCAACATGTGTGAGGTGTTGCGAATAAACCCAACAAGAGAGGGTATGATAAGTGACGGAAAATCAAGGTTCTCTACTATAAAAGACAAGGAACCTATAAGTCACTTCCTTGGCACATCCACTTTTAGCCAATACACAGTTGTTCATTCAGGAAGTGTTGTTAAGATCAATCCCACACTTCCTTTGGACAAAGCTTGTCTCCTCAGTTGTAGCATCTCAACAGGGATAGGATCAATTCTCAATGTTGCCAAACCAAAGAAGGGGGCTTCAATAGCAATATTTGGGCTTGGAACTGTTGGACTGGCTGCAGCCGAAGGTGCAAAAATTGCTGGAGCATCCAGGATAATTGGAATTGACAAGAATCCCAACAAACTTGAGTATGCCAGGAAATTTGGACTAACAGACTTCGTAAATCCAGAAGAACATGAAAGACCAGTTCATGAGGTCCTCAAAGAGATGACAAATGGTGGAGTTGATAGGTGCATAGAATGTACTGGAAACATTAATGCCTTAATGTCTGCAATGGAAGCTCTCCATGATGGATGGGGTGTTGCTGTACTTGTTGGAGTGCCTAGTGGTGATGCAGTTTTCAAGACTAATCCCTTCAATTTTCTTAATGAAAAGACAATTACAGGCACAACCTTTGGGAACTACAAGCCTAAGACTGGCCTACCAACACTAGTTGATATGTTCATGAACAACAAATTGGAGCTGGGCAAGTTTATAACTCATAGAGTTCCTCTTTCTGAAATCAATAAAGCCTTTGATTACATGATCAAAGGACAAGGTCTAAGGACAATCATAGACATGAACGACTAG 1278 0.4108 MHSLQKQRSLLFQYLRSSSNSNNIIHNSKMILSSSSSLLLASNFSSTAGKVIPCKAAVAWEAGKPLVIEDVEVAPPQAKEVRINIKYSSLCHTDLYFWESKSVPPVFPRILGHEASGVVESVGDGVSNLKPGDHVLPLFTGECGECPNCKCEDSNMCEVLRINPTREGMISDGKSRFSTIKDKEPISHFLGTSTFSQYTVVHSGSVVKINPTLPLDKACLLSCSISTGIGSILNVAKPKKGASIAIFGLGTVGLAAAEGAKIAGASRIIGIDKNPNKLEYARKFGLTDFVNPEEHERPVHEVLKEMTNGGVDRCIECTGNINALMSAMEALHDGWGVAVLVGVPSGDAVFKTNPFNFLNEKTITGTTFGNYKPKTGLPTLVDMFMNNKLELGKFITHRVPLSEINKAFDYMIKGQGLRTIIDMND* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1482 425 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 46 423 - -
Ahy2g1482 425 SMART PKS_ER_names_mod 63 421 IPR020843 GO:0016491
Ahy2g1482 425 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 213 388 IPR036291 -
Ahy2g1482 425 PANTHER ALCOHOL DEHYDROGENASE 46 423 - -
Ahy2g1482 425 CDD alcohol_DH_plants 52 422 - -
Ahy2g1482 425 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 112 126 IPR002328 GO:0008270|GO:0016491
Ahy2g1482 425 Pfam Zinc-binding dehydrogenase 252 371 IPR013149 -
Ahy2g1482 425 Pfam Alcohol dehydrogenase GroES-like domain 79 209 IPR013154 -
Ahy2g1482 425 SUPERFAMILY GroES-like 47 231 IPR011032 -
Ahy2g1482 425 Gene3D - 228 366 - -
Ahy2g1482 425 Gene3D - 62 415 - -
Ahy2g1482 425 SUPERFAMILY GroES-like 374 421 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1482 Ahy-Chr2 78710044 78726331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1482 80 425 Monolignol Biosynthesis Gene Families AT1G72680 24.069 8.79e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1482 K18857 - nnu:104602143 575.089