Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1444 ATGATGCCTAAACTTGATATTGTGTCTATCAAGGTAATGGTAAAGCCATCGTCTCCAACTCCTAATCACCTTAGAGATTTCAAAATCTCCCTCCTTGATGAGATGGCTCCTCCAATCTATATTCCAATAATTTTATTCTACTCAGCCACTGATATTAATAGTTCCTTTGGAACTCATGATGTCGAGACCATATCCAATAAATTAAAGGTTTCTTTATCCAAAGTTCTCACTCTATATTACCCATTATGTGGAAGATTGAAATGTACCTCACCATCCTCTGTTGATTGTAATGATGAAGGTGTACCTTACATTGAGTATAAATTCCCCACTAACCTTACCGATATTCTCAAAAGGCCTCAATCCCAAATGAAGGAGCTTTTGCCATTTGACCCATATAATAATGTTTCTAGTAGTTTGGATCATAATGATGACAAACACAAAGTGACCATGGCGGTTCAGTTGAGTGAATTCAAGTGTGGGGGTATTGCACTTGGTGTGTGCCTCTCACACAAGGTAGCAGATGCCGAAGCAACATCATCATTCCTCAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTCAACCAAGTAGACCCACCTCAAATGGATGCGGAATTGATTTTCCCTCCACGGGGAATAGAATGGGCCATGACTAGTCTCATGGTCGGTGGTGGCAATGAAAAGCTCGTGACCAAGTGTTTCTTGTTTAGTCCAACGGACTTGTCCAGATTGAGAGCTAGATTTGGAAGCTTTAATCCGACTCGCGTCGAAGCTGTCACAGCACTCATATGGAAATCAGCAATTCAAGTAGCAAAAGGAAGTTACAAGGCTTCTATGGTGTGCCACATCGTCAACATTCGCAACAGAATGGTGCCACCGTTGCCAAAAAACTTGTTTGGCAATCTTTGGCTTTATTCTATTTCTGAATTGGTGGATTTGGGTGACGGAGGTTATGGAACAGAAGAGTTGTGTGATTTGGTGGGGATGGTTAGGAATGCTATTAGAGAAACTAGTGCGGGTTATTCAGATATGCTGCTTCAAGGTGACGGTTTGGATGAGTTCGATGAATTCTTCAAGGAAGCAAGATTAAGGGTGGATGAAAATCTTGTTGCATGTTGTGGATTTAGTAGTTGGACAAGATTTGGTTTCTATGAAGTTGATTTTGGATGGGGGAAGCCAATTAAGGTGAGAAACATTAATTTGCCTATGAAGAATGTGACATATTTGATTCCTACAAGAACTGGGGATGGCATAGAGGCATGGGTAACCATGACCGAGCTTGATATGGATGAATTCCAGCGTAACTCCGACCTTCTCCAGTTTGCCTTGCTGGAATCTTAA 1338 0.4141 MMPKLDIVSIKVMVKPSSPTPNHLRDFKISLLDEMAPPIYIPIILFYSATDINSSFGTHDVETISNKLKVSLSKVLTLYYPLCGRLKCTSPSSVDCNDEGVPYIEYKFPTNLTDILKRPQSQMKELLPFDPYNNVSSSLDHNDDKHKVTMAVQLSEFKCGGIALGVCLSHKVADAEATSSFLNAWAKTAKGLFNQVDPPQMDAELIFPPRGIEWAMTSLMVGGGNEKLVTKCFLFSPTDLSRLRARFGSFNPTRVEAVTALIWKSAIQVAKGSYKASMVCHIVNIRNRMVPPLPKNLFGNLWLYSISELVDLGDGGYGTEELCDLVGMVRNAIRETSAGYSDMLLQGDGLDEFDEFFKEARLRVDENLVACCGFSSWTRFGFYEVDFGWGKPIKVRNINLPMKNVTYLIPTRTGDGIEAWVTMTELDMDEFQRNSDLLQFALLES* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1444 445 Gene3D - 225 439 IPR023213 -
Ahy2g1444 445 PANTHER F21J9.9 7 441 - -
Ahy2g1444 445 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 7 441 - -
Ahy2g1444 445 Gene3D - 4 213 IPR023213 -
Ahy2g1444 445 Pfam Transferase family 11 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1444 Ahy-Chr2 76501608 76502945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1444 12 433 Monolignol Biosynthesis Gene Families AT5G48930 25.885 2.06e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1444 - K13065 gmx:100792323 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1687 12 91660787 91662151 Ahy2g1444 2 76501608 76502945 hybridization