Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1423 ATGAGTTCTCCAGGATCATCCTCAACCTCAAGAGTTTCAGTAGAAGAGCAAGCCCCATTGCCAAAGCCGGCTGATCCTGCAGCAAAATTATCAAGCGATGAGATTGCACCACTTTCAGGAAATCCATTCTTTCATGTAGTTCTTTCAAAATCACATGTTCGTCGTAGTTGTCTCATGGGGCCATCAAAGGACTTAGTAGATATACTTCCATTTGCTGAGGTCCCTACTGTTCTTAAGTGTGGAGGTGAGAGCTGGGACATGGTGTATCGTGGACATGCTCCGGGTCGCAAGTTCTTCGATGGAGGCTGGAGAAAATTTGTCAAAGCTAATTGTTTGGTAGAGGGAGATGCTTGTGTTTTCGAGCTCATGGCAAACAGTGATGAGAAAATTGTCTTTGAAGTTCAAATTCTCAGAGGTGATGTCCCCAAAGTGTTTTTTAAAAGGGATAGAATTGGTGAAAGTGAACAGAAGCCAATTGTCATTGACTAG 489 0.4335 MSSPGSSSTSRVSVEEQAPLPKPADPAAKLSSDEIAPLSGNPFFHVVLSKSHVRRSCLMGPSKDLVDILPFAEVPTVLKCGGESWDMVYRGHAPGRKFFDGGWRKFVKANCLVEGDACVFELMANSDEKIVFEVQILRGDVPKVFFKRDRIGESEQKPIVID* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1423 162 Pfam B3 DNA binding domain 44 133 IPR003340 GO:0003677
Ahy2g1423 162 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 13 147 IPR044837 -
Ahy2g1423 162 CDD B3_DNA 42 138 IPR003340 GO:0003677
Ahy2g1423 162 MobiDBLite consensus disorder prediction 1 15 - -
Ahy2g1423 162 SMART B3_2 44 140 IPR003340 GO:0003677
Ahy2g1423 162 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 13 147 - -
Ahy2g1423 162 Gene3D - 27 140 IPR015300 -
Ahy2g1423 162 SUPERFAMILY DNA-binding pseudobarrel domain 39 138 IPR015300 -
Ahy2g1423 162 ProSiteProfiles B3 DNA-binding domain profile. 43 140 IPR003340 GO:0003677
Ahy2g1423 162 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1423 Ahy-Chr2 75515566 75518845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1423 41 138 REM Transcription Factor Family AT1G49480 38.095 9.55e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy2g1423 B3 1.60E-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1423 - - adu:107474771 311.997