Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1405 ATGTCTAACATCAGCAACAATGTGGCTGGGGTTGACAACACCTTCAGAAGAAAATTCGATCGAGAAGAGTATTTGGAACGAGCTCGGGAGCGTGAGAGGCAGGAGGAGGAGGGTCGATCTAAATCTAAAGCTAAAGGTCCTCCAGTGCAGAGGAAACCCCTAAAACATAGAGATTATGAAGTGGACCTCGAGTCCCGCCTAGGCAAGACTCAAGTTGTTACGCCGGTTGCACCACTGAGTCAGCAGGCTGGATATTACTGCTCTGTTTGTGAGTGTGTGGTAAAGGACTCAGCGAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTTGAACGAGCCTCTCTCCAACAGGTTCAGGAACGATTTGAGGTTCTTAAGAAACGTAAAGATCTTGGCACATTCACCGAGCAAGATCTTGACGAAAGGGTTCTAAAACAGCAGCTAGAAGAGGAAGAAAGAAAACGATTGCGTCGTGAAAAGAAGAAGGAAAAGAAAGAGAAGGCAATGGAAGAACCGGAAATTGATCCTGATGTTGCGGCCATGATGGGGTTTGGTGGTTTCCGGTCATCAAAGAAATGA 606 0.4587 MSNISNNVAGVDNTFRRKFDREEYLERARERERQEEEGRSKSKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRKDLGTFTEQDLDERVLKQQLEEEERKRLRREKKKEKKEKAMEEPEIDPDVAAMMGFGGFRSSKK* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1405 201 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 201 IPR040107 GO:0000398|GO:0005681
Ahy2g1405 201 MobiDBLite consensus disorder prediction 159 183 - -
Ahy2g1405 201 Coils Coil 150 180 - -
Ahy2g1405 201 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Ahy2g1405 201 Gene3D Classic Zinc Finger 79 117 - -
Ahy2g1405 201 SUPERFAMILY beta-beta-alpha zinc fingers 80 122 IPR036236 -
Ahy2g1405 201 Pfam Zinc-finger of C2H2 type 85 109 - -
Ahy2g1405 201 MobiDBLite consensus disorder prediction 27 55 - -
Ahy2g1405 201 MobiDBLite consensus disorder prediction 159 201 - -
Ahy2g1405 201 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1405 Ahy-Chr2 74603499 74608206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1405 5 147 C2H2 Transcription Factor Family AT3G05760 83.217 4.66e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g1405 zf-C2H2_jaz 1.80E-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1405 K12848 - gmx:100527057 310.842