Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1404 ATGGGATTCTCTATAGCTATTCAAGAACAAACACCACAAGAGGATCAAGAAGCAAAGCCTTTCATGGCTTCAAATAGTGGTAGTTTTAAGAGCATCAACTCAAGTACTACACCTACTCAACTTGAACCACTCCATCTTCATCATAATCATCATCATCATCATCATAATCAAATACAAGAGCAACAACAACACCAAATTTCCTTCGGAATGATGCCATCTTCTTCTTCTTCATCTATCCCAGGAAACTATCTAAACAGAGATTCCGGAGCTTATGATTTGGGTGAACTGGATCAAGCCTTTTTCATGTATCTTGATGGCCAACCTGACCCCTCCACTCTTCAAGACCAAAGACGAATGAGGCCACCAACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTAGACCCCCCGCCATCCAATTCCAAGGCTACAACGGAATTGGTTTCTGCCCAAACCAATGGTTCCAAGAGACCATCAGAGCCGTCCATGGAATCAACCAACCCGCGAAATAATGCCGCTTCTGCTCCTGAACCACCCAAACCTATAAAGCGAGAGAACAACCGCAAGGGCACAACTTCAAGTTCTGAACAAGAGGGACCAAAAACACCAGATCCTAAGACACTAAGAAGACTTGCCCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTGAGGAAAAAGGCGTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTGAATCAGTTGGAACAAGAGTTACAGAGAGCCAGAGCTCAAGGCATTTTCATGGGTGGAAATGCACTTTTGGGAGGAGAACAAGGCCTTCCTCTTCCTATGACTACTATTACCTCAGAGGCAGCAATGTTTGACATGGAATATGGAAGGTGGTTAGAGGAGCACCACCGTCTAGTGTGCGAACTAAGAGCAGCGGTGCAGGAACACCTGCAGGAGAACGAGCTAAGAATGTACGTTGAAAATTGCTTGGGTCATTATGACCAAGTGATGAATCTGAAGAGCATTGTGGCCAAAACAGACGCATTTCATATTGTTTTTGGAATGTGGAAAACACCAGCTGAACGCTGTTTCATGTGGATCGGTGGCTTCAGGCCTTCTGAACTCATTAAGGTTATTATGGGTCAAATTGAGCCTCTTACGGAGCAACAAATATTAGGGATATGTGGGTTGCAACAAACAACACGTGAGGCAGAAGAAGCTCTATCCCAAGGGCTTGAAGCTCTCAATCAATCACTAACAGAAACCATAACATCAGATTCATTGAGTTCTCCACCAAACATGGTTAATTACATGGGACAAATGGCTGTGGCCATGAGCAAGCTTTCAACTATCGAAGGTTTCCTTAGGCAGGCAGATAATCTGAGGCAGCAAACACTGCACCGTCTGCATCAGATTCTAACAACACGGCAATCCGCAAGGTGTTTGCTGGCAATAGCGGAGTACTTCCATCGCCTTAGAGCTCTCAGTTCTCTTTGGATGTCACGCCCTCGCCAAGAATAA 1494 0.4505 MGFSIAIQEQTPQEDQEAKPFMASNSGSFKSINSSTTPTQLEPLHLHHNHHHHHHNQIQEQQQHQISFGMMPSSSSSSIPGNYLNRDSGAYDLGELDQAFFMYLDGQPDPSTLQDQRRMRPPTLNIFPSQPMHVDPPPSNSKATTELVSAQTNGSKRPSEPSMESTNPRNNAASAPEPPKPIKRENNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGIFMGGNALLGGEQGLPLPMTTITSEAAMFDMEYGRWLEEHHRLVCELRAAVQEHLQENELRMYVENCLGHYDQVMNLKSIVAKTDAFHIVFGMWKTPAERCFMWIGGFRPSELIKVIMGQIEPLTEQQILGICGLQQTTREAEEALSQGLEALNQSLTETITSDSLSSPPNMVNYMGQMAVAMSKLSTIEGFLRQADNLRQQTLHRLHQILTTRQSARCLLAIAEYFHRLRALSSLWMSRPRQE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1404 497 Gene3D - 205 254 - -
Ahy2g1404 497 ProSiteProfiles DOG1 domain profile. 279 493 IPR025422 GO:0006351|GO:0043565
Ahy2g1404 497 Coils Coil 225 252 - -
Ahy2g1404 497 PANTHER TRANSCRIPTION FACTOR TGA9 92 496 - -
Ahy2g1404 497 MobiDBLite consensus disorder prediction 1 43 - -
Ahy2g1404 497 SUPERFAMILY Leucine zipper domain 206 248 IPR046347 GO:0003700|GO:0006355
Ahy2g1404 497 CDD bZIP_HBP1b-like 206 258 - -
Ahy2g1404 497 Pfam Seed dormancy control 297 371 IPR025422 GO:0006351|GO:0043565
Ahy2g1404 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 248 IPR004827 GO:0003700|GO:0006355
Ahy2g1404 497 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Ahy2g1404 497 MobiDBLite consensus disorder prediction 1 83 - -
Ahy2g1404 497 MobiDBLite consensus disorder prediction 136 173 - -
Ahy2g1404 497 Pfam bZIP transcription factor 206 244 IPR004827 GO:0003700|GO:0006355
Ahy2g1404 497 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 92 496 - -
Ahy2g1404 497 MobiDBLite consensus disorder prediction 105 209 - -
Ahy2g1404 497 MobiDBLite consensus disorder prediction 60 83 - -
Ahy2g1404 497 SMART brlzneu 202 268 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1404 Ahy-Chr2 74466992 74478266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1404 81 497 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.431 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy2g1404 DOG1 6.10E-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1404 K14431 - gmx:100815176 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1633 12 88826054 88838173 Ahy2g1404 2 74466992 74478266 hybridization
Ahy16g0358 16 7110352 7116172 Ahy2g1404 2 74466992 74478266 PCT
Ahy6g0972 6 12796647 12802279 Ahy2g1404 2 74466992 74478266 PCT
Ahy2g1404 2 74466992 74478266 Ahy16g0358 16 7110352 7116172 PCT
Ahy2g1404 2 74466992 74478266 Ahy6g0972 6 12796647 12802279 PCT