Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1396 ATGGTTGTGACTAAAGTTGTTACAATCCCGTCTGCCATAGAATGTACGGAAATTACTGAGTTGGAATGTGATGACACGGAACTTGTTGATGAGTTACCAGACTATAGTTGCCTTGCTGACGATGAAATACCAAAAGTTAGGATGCGGATGACAAAGCAACCGATCAACCAATCTATCCATTGCAATCGGGAGGGTTTCTGGGCGTCTCGTTTCAAGGCACCCATACGGAAGAACACTATGACAGGTGTGGGATGCAGAGCAAGAATATATGCAAAGTTCGATAGGGAAAAGCATGATTGGGTCTTGTTAAAGGTTGAACTAAATCACTCGCACCCATGTTCAACTAGGAAGGCGGCGCACTACCACGAGAACAGGGAGTTAACAATGCATGCGAAGTGTATCATTGAGATTAATGATGAGGCGGGCATTCGACCCAACAATACCTTTCTAGCATTAGCCAATGAGGTTGGTGGGCCTTCGAACTTGGGCTTCTCAGAGAAGGACGTTAGGAATTACATTTCATCAAGACTCCAATCCACAAATGTCAACGCAGATATCAAGGAGATGCTGAACTACTTCATGCGAATGAAGGAGTTGAATCCGAACTACTTTTACACAGTGAATATAAATGAGGATAACAAGTTTACGAGTGCAGTTTGGGTGGATGCAAGGTGTAGGGCATCTTATAAATACTATGGAGAGGTGGTCTCATTTGATATCACATACAGCACGAACCGGCATGGATTGCCGTTTGCTGCTTTCATTGGTGTGAACTACCATGGTAAGTCTACTTTGCTAAGCTGCGCTCTGCTAGGCAGTAAGGAGAATCCGAGTTTTGAGTGGGTGTTCACACAATGGCTGGAGTGCATGGAAACGACACCGAAGGGCATCATCACAGACCAATGCAAGTCTATGTTTGGTGCAATTAAGAAGGTCCTGCCCAATACACGACACCGGTGGTGCATATGGCATATAACACAAAAGATACACAACAAGCTTGGAGGTTATTCTAGGTTTAAAGAGTTGAATGCTGAGTTGAAACACATTATATGGAACTCTAAGTCGGTTAAGGATTTCGAAGATCATTGGGCTGAATTCATTGATGAGTTCAACTTACATCACAACAGATGGCTATCAGATCTGTTTGAGGACCGACACATGTGGGTGCCTATCACTAGTTTGGTCCAGTTTGTTCACGAGTTCGACAATGTCCTAGGAACGAAAGGGCAGAAGGAACTGGAGGACGATGTTGCAGACTCGAGAGGTCTAATCCCATGTTCAACTAGATCAGCCATCGAGAGATGA 1305 0.4429 MVVTKVVTIPSAIECTEITELECDDTELVDELPDYSCLADDEIPKVRMRMTKQPINQSIHCNREGFWASRFKAPIRKNTMTGVGCRARIYAKFDREKHDWVLLKVELNHSHPCSTRKAAHYHENRELTMHAKCIIEINDEAGIRPNNTFLALANEVGGPSNLGFSEKDVRNYISSRLQSTNVNADIKEMLNYFMRMKELNPNYFYTVNINEDNKFTSAVWVDARCRASYKYYGEVVSFDITYSTNRHGLPFAAFIGVNYHGKSTLLSCALLGSKENPSFEWVFTQWLECMETTPKGIITDQCKSMFGAIKKVLPNTRHRWCIWHITQKIHNKLGGYSRFKELNAELKHIIWNSKSVKDFEDHWAEFIDEFNLHHNRWLSDLFEDRHMWVPITSLVQFVHEFDNVLGTKGQKELEDDVADSRGLIPCSTRSAIER* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1396 434 Pfam MULE transposase domain 235 328 IPR018289 -
Ahy2g1396 434 Pfam FAR1 DNA-binding domain 47 114 IPR004330 -
Ahy2g1396 434 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 50 391 - -
Ahy2g1396 434 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 391 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1396 Ahy-Chr2 74132663 74134780 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy2g1396 MULE 3.70E-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1396 - - ahf:112726395 910.983