Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1386 ATGGATTCAAATTCGCTTCAAGGCTATCAACTTGAACAACAACAAAGCAGTAGTTCTGGTTTGCTTCGTTATCGCTCTGCACCGAGTTCGCTTCTCGCGAATCTCACTCCAACTTTCACTGAATCCCAAACCTTGCTCTCGAGATTCGCCAATAGTAATAGCAGTAGCAGCAAGAACAATATTTCCAAAACCGATACCGTTTCGCATAGCTTCCAAGAATTCCCAGATACAAACACAAACACAAAACCAACCAATAAGGGTTGTGATTCGAAGGGTCTGAGGCGGATGAATTCTGGAGGGCACGGATATGGTGGTGGTGGATTGCCACCTCACTACCCAAGGAACACTTCTTCTTCTTCTTGTTCATCTTCAATGGATGGGTCTTTAGGGTTGGTTATGGGTTCAATGGGAATGGACCAAAAAGGGTTTGGCGTTTCTTCTTCTTTAAATCTTCTCAGGCAGAATAGTTCCCCTGCTGACCTTTTCTCCAACGTTTCATTTCAAAATGGATTTGCTACCATGAAAGGTGTCGGGAACTATGGTCATGTTAACAGCACCAGCGAAGAACTTAGTCCATCGATGAACAGATTGAAGAATCAGATTAGCTTCTCATCAAGAACTGCTTCTTCCTTGGGAATGTTGTCGCAGATCTCCGAAATAGGGAGCGAGGAAATTGGGGCAAATAGCCCTGACGATGGGAGGCAGGGTGGTAGCAATGGTGATGCCTTGCATTACAGCCCCGGATTCTCCTATGGTTCTTGGAATGATGCACCACAACAGTCTGAAAACCTCACTGGCTTGAAAAGAGGGCGAAGTAGCAATGGAAAGTTGTTTCCTGATGTTCAGAATGGAGAGCTAGGAAATCAAGTTCATATGCTATCACATCACTTGAGTTTGCCGAAAACTTCATCAGAGATGATTGGTATGGAGAATCTGCTTCAGTTCCCAGATTCTGTTCCTTGTAAAATCAGAGCGAAGCGAGGCTGCGCTACTCATCCCCGAAGCATAGCTGAAAGGGTACGAAGAACACGGATCAGTGAACGAATGAGGAAATTGCAAGAGCTGGTCCCAAACATGGACAAGCAAACCAACACAGCAGACATGTTGGACTTGGCGGTTGACTACATTAAAGATCTTCAGAAACAATTCAAGAATCTAAGTGAAAAGAGGGCAAACTGCAAATGTATAAGCATGCGGAGAGCAGATACAAATCAAATTGTTTAA 1224 0.4428 MDSNSLQGYQLEQQQSSSSGLLRYRSAPSSLLANLTPTFTESQTLLSRFANSNSSSSKNNISKTDTVSHSFQEFPDTNTNTKPTNKGCDSKGLRRMNSGGHGYGGGGLPPHYPRNTSSSSCSSSMDGSLGLVMGSMGMDQKGFGVSSSLNLLRQNSSPADLFSNVSFQNGFATMKGVGNYGHVNSTSEELSPSMNRLKNQISFSSRTASSLGMLSQISEIGSEEIGANSPDDGRQGGSNGDALHYSPGFSYGSWNDAPQQSENLTGLKRGRSSNGKLFPDVQNGELGNQVHMLSHHLSLPKTSSEMIGMENLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQFKNLSEKRANCKCISMRRADTNQIV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1386 407 MobiDBLite consensus disorder prediction 50 87 - -
Ahy2g1386 407 MobiDBLite consensus disorder prediction 251 283 - -
Ahy2g1386 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 393 IPR036638 GO:0046983
Ahy2g1386 407 MobiDBLite consensus disorder prediction 252 270 - -
Ahy2g1386 407 Gene3D - 330 400 IPR036638 GO:0046983
Ahy2g1386 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Ahy2g1386 407 PANTHER TRANSCRIPTION FACTOR BHLH130 13 399 - -
Ahy2g1386 407 SMART finulus 335 385 IPR011598 GO:0046983
Ahy2g1386 407 Coils Coil 369 396 - -
Ahy2g1386 407 MobiDBLite consensus disorder prediction 223 242 - -
Ahy2g1386 407 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 399 - -
Ahy2g1386 407 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
Ahy2g1386 407 MobiDBLite consensus disorder prediction 1 21 - -
Ahy2g1386 407 MobiDBLite consensus disorder prediction 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1386 Ahy-Chr2 73674522 73677668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1386 1 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 46.985 9.17e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy2g1386 HLH 4.30E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1386 - - aip:107625483 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1618 12 87721576 87724841 Ahy2g1386 2 73674522 73677668 hybridization
Ahy16g0369 16 7224047 7228598 Ahy2g1386 2 73674522 73677668 PCT
Ahy6g0959 6 12661315 12665701 Ahy2g1386 2 73674522 73677668 PCT
Ahy2g1386 2 73674522 73677668 Ahy16g0369 16 7224047 7228598 PCT
Ahy2g1386 2 73674522 73677668 Ahy6g0959 6 12661315 12665701 PCT