Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1381 ATGGAGCACGCCGCACTAGACTCCATCCAATTCAACGAGCAAATCCAGGGGCTAATGGCTCCGGCGCCGGAATCCACCAACTCCTTCACGGCGCTCCTCGAGCTACCTCCGCCGCAGGCCGTCAAGCTACTCCACTCGCCGGATAAGGCTCCCACCGGTTCCGAAAAACCGCCCTGCCACGCCAGCATCCTGAAACCCTATCCCTCCATCATGAGCATCATCGACGGAACCCGCAAGCTCACGTTCCCTTCCAACACCGCCCTAATCGAGCGCGCTGCGAGGTTCTCCGTGTTCGCCGGAGAGGGACCGCTGGCTCCACCGGTGGCGGAGGTAAAAAACGAGCCGCCGGAAACCGATTCCAACCCGAGCTCGACTCAGTGCGATCCTGCGGTTGAGAACAAGGGCGCGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAGGCGAGGTCGAAGAAGAGCAAGAGTGTCGCTGCCGCCGAAAGTTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGCGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAGAGGGCAAGGAGAGAGAAGATAAATGCTCGGATGAAACTTTTGCAAGAGCTGGTCCCCGGTTGCAACAAGATATCAGGCACAGCATTGGTTCTGGATGAAATCATCAACCATGTCCAATCTCTACAGCGACAAGTGGAGTTTTTATCAATGAAACTAGCAGCAGTTAACCCAAGAATTCATTTCAACCTTGACAGCATAATGCCTAATGAAGGGGCATCTCTAATGGACAGTAGCATTCCTAACATGGTTTCACCCCTCATGTGGCCGGAAATCCCAAACAATGGAAATAGAGAACAATATCAGCAACCATGGCAATTTGATGCATTCCAGCAACCAGTTTGGGGAAGGGAAGAAGAAAACACCAATTTCATGACTCCCGAAAACTCAATGTTGAGTTATGATTCATCAGCTAATTCAGTACCTCTGCAATCGAATCAGTTGAAGATGGAGCTCTGA 1017 0.5251 MEHAALDSIQFNEQIQGLMAPAPESTNSFTALLELPPPQAVKLLHSPDKAPTGSEKPPCHASILKPYPSIMSIIDGTRKLTFPSNTALIERAARFSVFAGEGPLAPPVAEVKNEPPETDSNPSSTQCDPAVENKGAKRKEREKKVKARSKKSKSVAAAESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIHFNLDSIMPNEGASLMDSSIPNMVSPLMWPEIPNNGNREQYQQPWQFDAFQQPVWGREEENTNFMTPENSMLSYDSSANSVPLQSNQLKMEL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1381 338 Coils Coil 218 238 - -
Ahy2g1381 338 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 338 IPR024097 GO:0006355
Ahy2g1381 338 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 338 - -
Ahy2g1381 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 248 IPR036638 GO:0046983
Ahy2g1381 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Ahy2g1381 338 CDD bHLH_AtBPE_like 168 253 - -
Ahy2g1381 338 SMART finulus 184 234 IPR011598 GO:0046983
Ahy2g1381 338 MobiDBLite consensus disorder prediction 116 130 - -
Ahy2g1381 338 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Ahy2g1381 338 Gene3D - 175 249 IPR036638 GO:0046983
Ahy2g1381 338 MobiDBLite consensus disorder prediction 106 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1381 Ahy-Chr2 72775309 72781329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1381 5 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 50.532 1.03e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy2g1381 HLH 1.20E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1381 - - aprc:113872810 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1613 12 87259732 87265744 Ahy2g1381 2 72775309 72781329 hybridization
Ahy16g0378 16 7348496 7353656 Ahy2g1381 2 72775309 72781329 PCT
Ahy6g0947 6 12390846 12396139 Ahy2g1381 2 72775309 72781329 PCT
Ahy2g1381 2 72775309 72781329 Ahy16g0378 16 7348496 7353656 PCT
Ahy2g1381 2 72775309 72781329 Ahy6g0947 6 12390846 12396139 PCT