Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1362 ATGGCGCCAAAGAATAAGAAGAGAGCTAGGGTTTCCAACGACGAAGAAGAAATCGAATATGAACACCCACACTCCCCTCAGAACAACAACGAAAACACCCTCTATCAGGTACTTGGTGTAGAGAGAACAGCATCACAACAGGAAATAAAGAAGGCTTATTACAAGTTAGCATTGAGGCTGCATCCTGACAAGAACCCTGGTGATGAGGAAGCTAAAGCAAAATTTCAGCAACTGCAAAATATTATCTCGATTCTTGGGGATGAAGAGAAACGAGCCATTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCCGGGGATGTTGTCCAGAATCTTCACAACTACTTTAGAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCAGAGAAAAATGATTTGATTGATTTGTACAAGAAGTGCAAGGGTCATATGAACAGGCTATTCTGTTCAATGCTTTGTTCTGATCCCAAATTTGATTCTCACCGATTCAAGGATATTCTTGATGAGGCCATAGCAGCTGGAGAACTTAAAGAAACAAAAGCTTATAAGAAATGGGCAAAAAGAATATCAGAAATCAAGCCACCAACTAGTCCGTTAAGGAGGAGGGTCAAACCAAGTAAGAAACCAGAAACAGATCTTTATGCCATCATCTCACAACGTCGAAATGAGAGAAGAGACAAGTTTGAATCTATGTTTTCATCTCTAGTTTCAAAATATGGTGGAAGTAATGTGCCGGAACCCTCTGAAGAGGAATTTGAAGCTGCGCAAAGGAAGATGGAAAGCCGACGTTCCGCAAAGAAATCAAAGCGGAAATAA 855 0.4082 MAPKNKKRARVSNDEEEIEYEHPHSPQNNNENTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNIISILGDEEKRAIYDQTGCVDDADLAGDVVQNLHNYFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGHMNRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKETKAYKKWAKRISEIKPPTSPLRRRVKPSKKPETDLYAIISQRRNERRDKFESMFSSLVSKYGGSNVPEPSEEEFEAAQRKMESRRSAKKSKRK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1362 284 SMART dnaj_3 32 90 IPR001623 -
Ahy2g1362 284 SUPERFAMILY Chaperone J-domain 32 116 IPR036869 -
Ahy2g1362 284 PRINTS DnaJ domain signature 35 53 IPR001623 -
Ahy2g1362 284 PRINTS DnaJ domain signature 53 68 IPR001623 -
Ahy2g1362 284 PRINTS DnaJ domain signature 90 109 IPR001623 -
Ahy2g1362 284 PRINTS DnaJ domain signature 70 90 IPR001623 -
Ahy2g1362 284 MobiDBLite consensus disorder prediction 251 284 - -
Ahy2g1362 284 MobiDBLite consensus disorder prediction 1 31 - -
Ahy2g1362 284 ProSiteProfiles dnaJ domain profile. 33 98 IPR001623 -
Ahy2g1362 284 Pfam DnaJ domain 34 95 IPR001623 -
Ahy2g1362 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 5 284 IPR042977 -
Ahy2g1362 284 CDD DnaJ 33 87 IPR001623 -
Ahy2g1362 284 Gene3D DnaJ domain 19 112 IPR036869 -
Ahy2g1362 284 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 5 284 - -
Ahy2g1362 284 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1362 Ahy-Chr2 72228242 72231300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1362 35 95 C2H2 Transcription Factor Family AT1G74250 40.909 1.63e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1605 12 86813736 86816817 Ahy2g1362 2 72228242 72231300 hybridization
Ahy16g0382 16 7409658 7412381 Ahy2g1362 2 72228242 72231300 PCT
Ahy6g0943 6 12350953 12353726 Ahy2g1362 2 72228242 72231300 PCT
Ahy2g1362 2 72228242 72231300 Ahy16g0382 16 7409658 7412381 PCT
Ahy2g1362 2 72228242 72231300 Ahy6g0943 6 12350953 12353726 PCT