Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1361 ATGGAGAGTGACAAGATGGAAGATTATGAAGTGATACAGCAGCTTGGAAGAGGAACATTGGGTGCCACTTTTCTTGTTCTCCATAAAACTCAGAAACAACGGTGTGTGCTCAAGAAGATTCGGTTCTCTAAGCAAACAGATAAGTCACAGCTATCATCAGCACCCCAAGAGATGAACCTGATTGCAAAACTAAGTAGCCCTTATATTGTGGAGTGCAAAGATGCTTGGGTAAAAAAGGGGGACTATGTATACATTATATCTGCTTATTGTGAAGGAGGTGACATGGCTCAGTATATAAAGAAAGCTCGAGGATCATTCTTCCCTGAGGAGAGAGTTTGCAAATGGATGACTCAGTTGTTGCTAGCTGTGGACTACCTGCACTCCAATCGAGTACTCCACAGAGATCTTAAGTGTTCCAACATACTCCTCACGAGAGACAATAACATTCAGCTAGGTGACTTTGGTCTTGCAAAGCTACTTAATAAAGAAGACCTTCCTTCCCCGGTTATTGGAACTCCAAACTACATGTGTCCTGAGCTTCTAGATAATATACCTTACGGTTATAAATCCGATATATGGGCCCTTGGTTGCTGCATGTTTGAAATCGTCGCACATCAACCAGCACTTCGTGCTCCGGACAGGGCAGGACTAATCAATAAGATAAATAGATCCTCGATTTCTCCATTTCCAATTGTTTACACTCCCACACTGAAACAACTGATTAAAAGCATGCTGAGGAGAAATCCAGAACATAGACCTACAGCAGCCGAGTTATTAAGGCATCCTCATTTACTACCTTATGTTCTTCGCTGTCGCAATGCATCGCCTGTTTTTCTTCCGGTACATCTCATAAATAGTAGCCCAAAGGATAAAACAAAGCAATCTCCCAAAAAATCTAGTGGTGGCAGAGATCATAGAGAAAAACAAGAAGGATTTGCAAATCATATGGAGCAAGTTCGTCTTACGGAGGTACATGTAACTAATCATCATAATGATGGCAAACTAAGAGTCTCGACAAGTGCCGAAGACTTCCTTGAAACCAAGATGGTTGATCCTACCAGCTACACGATGGAAACTGCAGCCAGTGTTAGTGGCTCGAAAGATGGGTCAATTACTTCTGATTCAACCATTTGCAGTGTGTGCAAGGAAGCAGACTTTAAAGGTAGACTTGCAAAGGAAGCAACAGAAAGTGAGATCACATCAAAGAGTACACTAGATTCTGTGAATGTGGAACAAGGATTTGCTGCTGAAAATTTTCTCCAGTCAGATTCAGTTAATGTAACTACAGCAGCCACAAAAATCGAAGACACTCTTCCCAAACCCATGGACTCCTGTAAATCAATAATGTCTAGTCAAGACAGTACTGTCGGCAATGATAAAGATGACTTTGTCAACGAAGAAAGATCATCCCCAGTTTTGCAGCCGGTCAGGCTCGAGAAAGACACCGAATCTGATAGCAGCTTAAAGAAAAGTGAAAACCATGATGTATTTACTGAAGTCTCACATTTGGACTGCTTGTCATCTGCAAGTAACGATACACTTCCCGGCAAGGATGAAGGCGTTGCAACCACAGCTGCGCATAAAGAAGGCAGTAATGCCGCAGTAGTTGTTGATAAAGCGACAAATGGCATTTCTTTAAGCAGACCTACTTCAAAAGGTGGGGACGGAACAACAAAGAGTGTGTTGATTAATAGATCCCAGAACAGAGCTGATGCTCTGGAAGCTTTGCTTGAGTTATGTGCTCAGCTGCTTAAACAAGGGAAACTTGATGAACTGGCTGCTGTGTTAAGACCATTTGGAGAAGACACTGTCTCATCAAGAGAAACAGCAATATGGCTGACAAAGAGTCTTCTTTCATCACAGAAATTTAATTCAGAAACCTAA 1884 0.4204 MESDKMEDYEVIQQLGRGTLGATFLVLHKTQKQRCVLKKIRFSKQTDKSQLSSAPQEMNLIAKLSSPYIVECKDAWVKKGDYVYIISAYCEGGDMAQYIKKARGSFFPEERVCKWMTQLLLAVDYLHSNRVLHRDLKCSNILLTRDNNIQLGDFGLAKLLNKEDLPSPVIGTPNYMCPELLDNIPYGYKSDIWALGCCMFEIVAHQPALRAPDRAGLINKINRSSISPFPIVYTPTLKQLIKSMLRRNPEHRPTAAELLRHPHLLPYVLRCRNASPVFLPVHLINSSPKDKTKQSPKKSSGGRDHREKQEGFANHMEQVRLTEVHVTNHHNDGKLRVSTSAEDFLETKMVDPTSYTMETAASVSGSKDGSITSDSTICSVCKEADFKGRLAKEATESEITSKSTLDSVNVEQGFAAENFLQSDSVNVTTAATKIEDTLPKPMDSCKSIMSSQDSTVGNDKDDFVNEERSSPVLQPVRLEKDTESDSSLKKSENHDVFTEVSHLDCLSSASNDTLPGKDEGVATTAAHKEGSNAAVVVDKATNGISLSRPTSKGGDGTTKSVLINRSQNRADALEALLELCAQLLKQGKLDELAAVLRPFGEDTVSSRETAIWLTKSLLSSQKFNSET* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1361 627 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1361 627 Gene3D Transferase(Phosphotransferase) domain 1 92 341 - -
Ahy2g1361 627 MobiDBLite consensus disorder prediction 285 309 - -
Ahy2g1361 627 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 4 466 - -
Ahy2g1361 627 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 468 610 - -
Ahy2g1361 627 SUPERFAMILY Protein kinase-like (PK-like) 6 304 IPR011009 -
Ahy2g1361 627 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 4 466 - -
Ahy2g1361 627 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 468 610 - -
Ahy2g1361 627 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1361 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Ahy2g1361 627 MobiDBLite consensus disorder prediction 291 309 - -
Ahy2g1361 627 CDD STKc_Nek 8 264 - -
Ahy2g1361 627 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1361 627 MobiDBLite consensus disorder prediction 442 493 - -
Ahy2g1361 627 MobiDBLite consensus disorder prediction 478 493 - -
Ahy2g1361 627 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Ahy2g1361 627 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1361 Ahy-Chr2 72135136 72143464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1361 15 264 MAP Kinase Kinase Kinase AT1G53570 32.283 5.42e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy2g1361 Pkinase 2.60E-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1361 K08857 - gmx:100793379 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1603 12 86780170 86788517 Ahy2g1361 2 72135136 72143464 hybridization
Ahy16g0383 16 7423021 7428417 Ahy2g1361 2 72135136 72143464 PCT
Ahy6g0941 6 12318157 12323459 Ahy2g1361 2 72135136 72143464 PCT
Ahy2g1361 2 72135136 72143464 Ahy16g0383 16 7423021 7428417 PCT
Ahy2g1361 2 72135136 72143464 Ahy6g0941 6 12318157 12323459 PCT