Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1333 ATGGCAGCACAAAATTCGGATGCATGTCCTTCTAGATCCTCTAGCATCTCTGAAGGGAGTGGTAATAACACCAACAATTCGAGGGACAATGATTTGGCAACCGAACTGGTGGATCAAGCCTCCAATTCGAGAACGATGTTGGCATTTGTAAAGCTCTCGAATGATGATTCATCGCTTCGTTGTTCTTCGAAAGTGCAGGAGCTCGATTTTTTCAACCCGGGAAAGAGGGTGACGAAAGAATCCTCGCCTTCTTTGGCTAACAACATTGATGAAGGAAAGAATAAAAACACCGAGGAGAAGACTACTTCAGAGTCTAGAACCTTCTCTTGTAACTTCTGCAACAGAAATTTCTCGTCTTCGCAAGCCCTAGGAGGGCACCAAAATGCACACAAACAGGAGCGCGCCATAGCGAAACGTCGCCAAGCAATCGACGCAACTGGCTTTGGTCACCCTCACTTTCCTTATTATTCTACTTACCCTAGCCTGACCTCTCACCCTTTATATAATAGGGCACTTGGGGTAAGGATCGACTCCATGATTCACAAACCTAATTCTTATCCTTGGTCTCACCTTAGGTTCGATCATAATAACCATAATTGGTCACGGTCAGGGATGCTTGAGGGATTGCAACTAAATGGGGGAGGTTCTTCAAATTTGAATTTGTTTAGAGAAGATGATAACGGCGGTAGTAGAACTATTCCCCTATTCGGAGTTTCTTCTACAGATGTTGCTTCTACTTCTAATGCAGCCATCAATAACAACCCAACAATAAGGATTGATGATACTCATGATCAGAATCCAAAGCCAGATGAACCTTCCACTACTATGTCTCCAAGCCTTGATTTGTCGCTTAAGCTTTAA 861 0.4367 MAAQNSDACPSRSSSISEGSGNNTNNSRDNDLATELVDQASNSRTMLAFVKLSNDDSSLRCSSKVQELDFFNPGKRVTKESSPSLANNIDEGKNKNTEEKTTSESRTFSCNFCNRNFSSSQALGGHQNAHKQERAIAKRRQAIDATGFGHPHFPYYSTYPSLTSHPLYNRALGVRIDSMIHKPNSYPWSHLRFDHNNHNWSRSGMLEGLQLNGGGSSNLNLFREDDNGGSRTIPLFGVSSTDVASTSNAAINNNPTIRIDDTHDQNPKPDEPSTTMSPSLDLSLKL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1333 286 MobiDBLite consensus disorder prediction 246 286 - -
Ahy2g1333 286 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Ahy2g1333 286 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Ahy2g1333 286 Gene3D Classic Zinc Finger 87 147 - -
Ahy2g1333 286 MobiDBLite consensus disorder prediction 269 286 - -
Ahy2g1333 286 MobiDBLite consensus disorder prediction 77 91 - -
Ahy2g1333 286 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 6 286 - -
Ahy2g1333 286 MobiDBLite consensus disorder prediction 246 260 - -
Ahy2g1333 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Ahy2g1333 286 MobiDBLite consensus disorder prediction 1 32 - -
Ahy2g1333 286 MobiDBLite consensus disorder prediction 74 103 - -
Ahy2g1333 286 PANTHER ZINC FINGER PROTEIN JAGGED 6 286 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1333 Ahy-Chr2 69124741 69125601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1333 101 207 C2H2 Transcription Factor Family AT5G10970 44.643 1.74e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g1333 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1333 - - adu:107474629 544.273