Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy2g1333 | ATGGCAGCACAAAATTCGGATGCATGTCCTTCTAGATCCTCTAGCATCTCTGAAGGGAGTGGTAATAACACCAACAATTCGAGGGACAATGATTTGGCAACCGAACTGGTGGATCAAGCCTCCAATTCGAGAACGATGTTGGCATTTGTAAAGCTCTCGAATGATGATTCATCGCTTCGTTGTTCTTCGAAAGTGCAGGAGCTCGATTTTTTCAACCCGGGAAAGAGGGTGACGAAAGAATCCTCGCCTTCTTTGGCTAACAACATTGATGAAGGAAAGAATAAAAACACCGAGGAGAAGACTACTTCAGAGTCTAGAACCTTCTCTTGTAACTTCTGCAACAGAAATTTCTCGTCTTCGCAAGCCCTAGGAGGGCACCAAAATGCACACAAACAGGAGCGCGCCATAGCGAAACGTCGCCAAGCAATCGACGCAACTGGCTTTGGTCACCCTCACTTTCCTTATTATTCTACTTACCCTAGCCTGACCTCTCACCCTTTATATAATAGGGCACTTGGGGTAAGGATCGACTCCATGATTCACAAACCTAATTCTTATCCTTGGTCTCACCTTAGGTTCGATCATAATAACCATAATTGGTCACGGTCAGGGATGCTTGAGGGATTGCAACTAAATGGGGGAGGTTCTTCAAATTTGAATTTGTTTAGAGAAGATGATAACGGCGGTAGTAGAACTATTCCCCTATTCGGAGTTTCTTCTACAGATGTTGCTTCTACTTCTAATGCAGCCATCAATAACAACCCAACAATAAGGATTGATGATACTCATGATCAGAATCCAAAGCCAGATGAACCTTCCACTACTATGTCTCCAAGCCTTGATTTGTCGCTTAAGCTTTAA | 861 | 0.4367 | MAAQNSDACPSRSSSISEGSGNNTNNSRDNDLATELVDQASNSRTMLAFVKLSNDDSSLRCSSKVQELDFFNPGKRVTKESSPSLANNIDEGKNKNTEEKTTSESRTFSCNFCNRNFSSSQALGGHQNAHKQERAIAKRRQAIDATGFGHPHFPYYSTYPSLTSHPLYNRALGVRIDSMIHKPNSYPWSHLRFDHNNHNWSRSGMLEGLQLNGGGSSNLNLFREDDNGGSRTIPLFGVSSTDVASTSNAAINNNPTIRIDDTHDQNPKPDEPSTTMSPSLDLSLKL* | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 246 | 286 | - | - | |
Ahy2g1333 | 286 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 110 | 130 | IPR013087 | - | |
Ahy2g1333 | 286 | SUPERFAMILY | beta-beta-alpha zinc fingers | 105 | 135 | IPR036236 | - | |
Ahy2g1333 | 286 | Gene3D | Classic Zinc Finger | 87 | 147 | - | - | |
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 269 | 286 | - | - | |
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 77 | 91 | - | - | |
Ahy2g1333 | 286 | PANTHER | AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED | 6 | 286 | - | - | |
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 246 | 260 | - | - | |
Ahy2g1333 | 286 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 108 | 135 | IPR013087 | - | |
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Ahy2g1333 | 286 | MobiDBLite | consensus disorder prediction | 74 | 103 | - | - | |
Ahy2g1333 | 286 | PANTHER | ZINC FINGER PROTEIN JAGGED | 6 | 286 | IPR045320 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy2g1333 | Ahy-Chr2 | 69124741 | 69125601 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy2g1333 | 101 | 207 | C2H2 Transcription Factor Family | AT5G10970 | 44.643 | 1.74e-23 | 95.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy2g1333 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy2g1333 | - | - | adu:107474629 | 544.273 |