Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1313 ATGCCAACTAGCACTACTACACCTTATAAAAAGGAGCAGCCCTTGCCCCTTTCTTTACCTATATCATCACATCATCCATCTAAGTACCTTATTCTCTATTGCCATTCTAAAATCAAAACACACACTTGTCTTGGATTAGTTTCATTCCTTTCCCTCCAAGAAGTTAATCAATTAATGGCGTCTAGCTCAATGCAATCTTCGTCATCGTGGAGTGCTAAGGACAACAAAGCCTTTGAGAGGGCTCTGGCTGTTTACGACAAGGACACCCCTGACCGATGGTACAACATTGCCCGCGCCGTCGGCGGGAAAACCCCGGAGGATGTGAAGCGGCACTATGAGCGTCTTGTTCATGACGTTAGGCACATTGAGTCAGGGCAAGTGCCATACCCAAATTACAAGAAGAGTGGAGGTTCTAATTAG 420 0.4571 MPTSTTTPYKKEQPLPLSLPISSHHPSKYLILYCHSKIKTHTCLGLVSFLSLQEVNQLMASSSMQSSSSWSAKDNKAFERALAVYDKDTPDRWYNIARAVGGKTPEDVKRHYERLVHDVRHIESGQVPYPNYKKSGGSN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1313 139 ProSiteProfiles Myb-like domain profile. 62 116 IPR001005 -
Ahy2g1313 139 CDD SANT 76 116 IPR001005 -
Ahy2g1313 139 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
Ahy2g1313 139 ProSiteProfiles SANT domain profile. 65 120 IPR017884 -
Ahy2g1313 139 SMART sant 66 118 IPR001005 -
Ahy2g1313 139 Pfam Myb-like DNA-binding domain 68 114 IPR001005 -
Ahy2g1313 139 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 59 137 - -
Ahy2g1313 139 Gene3D - 60 129 - -
Ahy2g1313 139 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 59 137 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1313 Ahy-Chr2 67678614 67679541 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy2g1313 Myb_DNA-binding 1.90E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1313 - - ahf:112719426 274.248