Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1303 ATCGCAGCCTCTGGTGACCTTGTTCTATTATCATACATTGCTGGTTTGTTAACTGGCAGACCAAATTCAAAAGCTGTTGGACCCAATGGAGAGATCCTTAATGCAAAAGAAGCAATCCATGTGGCCGGAATTGGATCCGATTTCTTCGAGTTGCAACCTAAAGAAGGCCTTGCACTAGTGAATGGCATTGGTTCCAAACTAGCCTCAATTGTCCTATTTGAGGCCAATATCCTAGCTGTCTTATCTGAGGTTTTTTCGGCCATATTCGCGGAGGTGATGCAAGGGAAGCCAGAGTTCACTGACCATTTGACATACAAATTGAAGCACCATCTTGGACAAATTGAGGCTGCAGCCATAATGGAACACATTTTGGATGGTAGCTCATATGTCAAAGCCACCAAGAAGTTGCACGAGATGGATCCATTGCAAACTAAACAGGACAAATATGCACTTAGGACTTCACCTCAATGGCTTGGCCCTTTGATTGAAGTGATTAGATTCTCAACCAAATCAATTAAGAGGAAAATTAATTCTATTAACGATAACCATTTGATTGATGTGTCAAGGAACAAGGCTTTGCATGGTGGTAACTTTCAAGGTACTCCAATTGGTGTGTCTATGGATAACCCAAGATTGGCCATTGCATCAATTGAAAACTCATGCTTGCCTTCAAATCTAAGTGCTAGTAGGAAACCCAACTTGGATTATGGCTTCAAGGGAACTGAAATCGCAATGGCCTCTTACTGTTCCGAACTGCAATATCTTGCAAACCTGGTAACTAGCCATGTCCAGAATATTGAGCAGCATAACCAAGATGTGAACTCTCTTGGTTTGATTTTAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGACCTACTTGATTGTACTTTGCCAAGCCATTGATTTGAGGCATTTGGAGGAGAATTTGAAGAACACCGTAAAGAATACTATGAGCCAAGTTGCCAAGAGGACACTAACCACCAGCATCAACAGTGAACTCCACTTATTCTTAAGCTTGATGGTACTCAGTTGA 1050 0.4152 IAASGDLVLLSYIAGLLTGRPNSKAVGPNGEILNAKEAIHVAGIGSDFFELQPKEGLALVNGIGSKLASIVLFEANILAVLSEVFSAIFAEVMQGKPEFTDHLTYKLKHHLGQIEAAAIMEHILDGSSYVKATKKLHEMDPLQTKQDKYALRTSPQWLGPLIEVIRFSTKSIKRKINSINDNHLIDVSRNKALHGGNFQGTPIGVSMDNPRLAIASIENSCLPSNLSASRKPNLDYGFKGTEIAMASYCSELQYLANLVTSHVQNIEQHNQDVNSLGLILARKTNEAVEILKLMSSTYLIVLCQAIDLRHLEENLKNTVKNTMSQVAKRTLTTSINSELHLFLSLMVLS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1303 349 Gene3D Fumarase/aspartase (Central domain) 63 311 - -
Ahy2g1303 349 PANTHER PHENYLALANINE AMMONIA-LYASE 1 340 - -
Ahy2g1303 349 SUPERFAMILY L-aspartase-like 1 340 IPR008948 GO:0003824
Ahy2g1303 349 Gene3D - 312 340 IPR023144 -
Ahy2g1303 349 CDD PAL-HAL 1 309 IPR001106 -
Ahy2g1303 349 PANTHER HISTIDINE AMMONIA-LYASE 1 340 IPR001106 -
Ahy2g1303 349 Pfam Aromatic amino acid lyase 1 323 IPR001106 -
Ahy2g1303 349 Gene3D - 1 62 IPR024083 -
Ahy2g1303 349 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 1 340 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1303 Ahy-Chr2 66551291 66552340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1303 1 340 Monolignol Biosynthesis Gene Families AT2G37040 75.140 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1303 K10775 - gmx:100302735 557.37