Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1301 ATGTTATTGTTCAAATATTATGGTTTATTCCACCATGAAGCACCTCAAAATGGGTCTCAGTGCGCTGTGTGCTTGAGCGAGTTCAAAGACATGGACAAGCTCAGACTTTTGCCCAAGTGCAGTCACGTGTTTCACCCCGAGTGCATCGACGCGAATAAAGGTGGGGTTGGTGAGGGAGTTGATGGAGTTGTTGGGAAGTGTAATGGGACCTCAAAGGTGAGAGCTTTTGGGTTGTTGGTGAGGTCACATTCTACAGGTCACTCTCTTGTGGAACCGGGGAAGAGTTTGGAGAGTTTCACTTTGAGGTTGCCTGAGGAATTGAGGAAGCAGATTCTGGAAGCCAATCATAAGTTTAGTGGTGGTAGTGGTGGGATGAAGCATTCGGCAAGCTACGACGTCGTTTTGCAAAGTGAAGTTGGTGAAGGTAGTAGTAGTAATAAGGGGAGTAAGAATAGTAGGTGGGTGCTGTCTATGACACCTCCATTTGTTTTTCGCGGTTGGGGTCATTTTAGTACTTCTTCTGGTTTGGCACCGCCAAATGAGTACTCAACATGCTCTGGGATTCCTAGGCTTTGGGGTTCTTCAGCGGCAAGGGAAGAGAAAGGATGTGAAGGGAGAGAGGGTTTGCAACTGGTATGA 639 0.4726 MLLFKYYGLFHHEAPQNGSQCAVCLSEFKDMDKLRLLPKCSHVFHPECIDANKGGVGEGVDGVVGKCNGTSKVRAFGLLVRSHSTGHSLVEPGKSLESFTLRLPEELRKQILEANHKFSGGSGGMKHSASYDVVLQSEVGEGSSSNKGSKNSRWVLSMTPPFVFRGWGHFSTSSGLAPPNEYSTCSGIPRLWGSSAAREEKGCEGREGLQLV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1301 212 Pfam RING-like zinc finger 20 49 IPR001841 -
Ahy2g1301 212 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 68 137 - -
Ahy2g1301 212 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 20 51 - -
Ahy2g1301 212 PANTHER RING FINGER DOMAIN-CONTAINING 20 51 - -
Ahy2g1301 212 PANTHER RING FINGER DOMAIN-CONTAINING 68 137 - -
Ahy2g1301 212 SUPERFAMILY RING/U-box 16 51 - -
Ahy2g1301 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 53 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1301 Ahy-Chr2 66339419 66340176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1301 20 165 Rapid Response to Elicitors AT3G05200 32.673 1.12e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1301 K10664 - aip:107636030 176.407