Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1297 ATGCTCATGTTTTCTCCCATCTTTGCAGCTATCACTGTCGCTATTGCTGCCTTCACTCAGCACTGCCACCACCACTTCTACTGCCGTCACACCACACTTTTCGGTCTTCTGCGTTGTTGCGTTTCGTCTCTGCCCCTGCGAACTACTCAGAGCAAATTCTCTGCCATCTACAAACGAGTTCTCAGAGATGGTTCTTCTGTGGTCATCAGAAGTATTAATGTGACATGCTGCATACCTGAGGAAATTGAATTCTTGAAGGGATTGAGCCTGCTAACCTCACTGAGACATGAAAACATTATAAAGATGAGAGGTTTTTGTTACTCAAGTAGTAGAGGTCTTGGATATCTGCACAGCAATGAAGCAAGCAAACCTACAATGGTTCACCAAAATATTTTAGTTGAAAAAGTTCTTCTTGACAATCAGTTTAACCCATTGATCATGGATGCTGGGTTCCCCAAGCTTCTAGCAGACGACATTGTTTACTCGGCACCGAAAGTTGGTGCTGCCATGGGATACCTAGCTCCTGAATACATTACCACTGGACGCATCACCGAGAAGAGTGACGTTTATGCATTCGGTGTCATTGTTCTTTAA 594 0.4411 MLMFSPIFAAITVAIAAFTQHCHHHFYCRHTTLFGLLRCCVSSLPLRTTQSKFSAIYKRVLRDGSSVVIRSINVTCCIPEEIEFLKGLSLLTSLRHENIIKMRGFCYSSSRGLGYLHSNEASKPTMVHQNILVEKVLLDNQFNPLIMDAGFPKLLADDIVYSAPKVGAAMGYLAPEYITTGRITEKSDVYAFGVIVL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1297 197 Gene3D Phosphorylase Kinase; domain 1 47 109 - -
Ahy2g1297 197 Gene3D Transferase(Phosphotransferase) domain 1 110 197 - -
Ahy2g1297 197 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1297 197 PANTHER OS01G0253100 PROTEIN 111 197 IPR045271 GO:0004714|GO:0006468
Ahy2g1297 197 PANTHER OS01G0253100 PROTEIN 49 108 IPR045271 GO:0004714|GO:0006468
Ahy2g1297 197 Pfam Protein tyrosine and serine/threonine kinase 105 196 IPR001245 GO:0004672|GO:0006468
Ahy2g1297 197 SUPERFAMILY Protein kinase-like (PK-like) 52 196 IPR011009 -
Ahy2g1297 197 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 49 108 - -
Ahy2g1297 197 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 111 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1297 Ahy-Chr2 65824760 65826576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1297 47 197 Receptor kinase-like Gene Family AT1G53420 29.167 3.74e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ahy2g1297 PK_Tyr_Ser-Thr 1.50E-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1297 - - adu:107459368 381.719