Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1275 ATGGACCAGGTATTCACATTCGTTCTCCGCAAATCCGGCGCCCAGTGGACTGTGAAGCAGCACTCCGGCGACATCGAGGACTCCGCCTCCTCCACCTACGACCTTCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGGTGCTGTTACTGCTGCTCCTGCTGGTGGTGCTGCCGCAGAGAGCGCCGCCGCCCCTGCTGCCGAGAAGAAAGAAGAGAAGGTCGAGAAAGAGGAAGACGAAGATTTTGGAATGTCACTCTTTGATTAA 363 0.573 MDQVFTFVLRKSGAQWTVKQHSGDIEDSASSTYDLQRKLVNAARAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGGAVTAAPAGGAAAESAAAPAAEKKEEKVEKEEDEDFGMSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1275 120 Pfam 60s Acidic ribosomal protein 52 119 - -
Ahy2g1275 120 MobiDBLite consensus disorder prediction 97 112 - -
Ahy2g1275 120 MobiDBLite consensus disorder prediction 87 120 - -
Ahy2g1275 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 4 120 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1275 Ahy-Chr2 62789578 62790569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1275 4 69 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 69.697 2.90e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1275 K02942 - gmx:100527385 93.5893