Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1240 ATGCCTCGCCATTACCGTCGATTTTGCCGGGAGAAGATGCGTGGAAAGAAGAGCCGTGGGTCAGGCCAGAGATCGCCGAGGGGGAGAGAGCTGCCGTTGCGTCTACTGCAGGCTCGCCATCGTCGCCATCATGGAGCACCAGGAGGCCGTCACCGGTGCGAGCTCGCGGAGGGAGAGAGGGAGCACAAATATCCCATGGAGGAAATGAAACAAGATCTTGCTGAAGAGTTAGGGTTGACTAAGAAGCAAATTTCTGGATGGTTTTGCCACAAAAGGTTAAAAGATAAACGGTTGTTGAAAGATGAAGCCTTTGCTCCCATTCCCTCTTGTCATGAAAGATGA 342 0.5234 MPRHYRRFCREKMRGKKSRGSGQRSPRGRELPLRLLQARHRRHHGAPGGRHRCELAEGEREHKYPMEEMKQDLAEELGLTKKQISGWFCHKRLKDKRLLKDEAFAPIPSCHER* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1240 113 CDD homeodomain 61 97 IPR001356 GO:0003677
Ahy2g1240 113 MobiDBLite consensus disorder prediction 1 30 - -
Ahy2g1240 113 Gene3D - 35 108 - -
Ahy2g1240 113 SUPERFAMILY Homeodomain-like 38 104 IPR009057 -
Ahy2g1240 113 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 61 105 - -
Ahy2g1240 113 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 61 105 - -
Ahy2g1240 113 Pfam Homeodomain 60 97 IPR001356 GO:0003677
Ahy2g1240 113 MobiDBLite consensus disorder prediction 1 22 - -
Ahy2g1240 113 SMART HOX_1 40 102 IPR001356 GO:0003677
Ahy2g1240 113 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1240 Ahy-Chr2 59723173 59724826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1240 60 105 Homeobox Transcription Factor Family AT4G03250 69.565 6.16e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy2g1240 Homeodomain 1.40E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1240 - - adu:110277770 186.808