Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1234 ATGATGAACATGGACATGGACATGCCCCTTCCTGAAGAGCTCGAACTGCTCGAGCTCGAAAGGGACTACCCAGATTTTGACATCCCCGAACCCGAACAGGAACAGGAATTGCAACCGCAAAAGCAACCGCAAACGCACCCGCAACCAGAATCGCCAGATCTGGTGGTTCTTCCAGAACCCCAATCCAATGGCCACAAGCGGTCGCGTTCCGACGATCCTTCTCCAGTCAGGTCGCTTTCCGAGGAGAAGCGGGTTAGGGTTGGCGATTCTGCTGCCTCTGAGGTTGATGCAGTTTCCAATGACGATGAGGACTGGCTTCAATACTCACCTCCTCCTAGAGGCGTTCGAATGGAAGAAGAAGATAGGTTTGTGAAGGAGAAGGAGCTGTCAAGGTACGCTTGGGAGATCCACGGGGAGTGTATGCCGGTTACTGCGCCTAGCGGCGATAGAGTTTACGCAAAACTGAACCGCATTGAAGGGTTGGAACTCGCTAGGAAGTTGGACTGGAGAGCCAATTCTGCTGATCTAACTTTAGAACCTATTAATGCTCTCTTCGAAAGATTGGAGCAAGAGGCTATCGCTAAGACCATGGAAGCTAGTTTGGAGGGCCAAAGCTATCTAGATGTTCCTGCAACACAAATGGTGCATGAGCAACTTTGGGTAGATAAATATGCACCAAAGTCATTTACTGAGCTTCTTAGTGATGAACAAACAAATCGCGAGGTACTCTTATGGTTGAAACAATGGGACTCTGTTGTTTTTGGATCTGATATTCGAAGTACATCAGATGATGTTTTGTTTGCTTTGAAGAGACATTCTTCTGTTGCCCAAAATCAGCGACCTTTCAATTCAAAGTTTTCAAGGAGAAACAGAGGAGCCAAATGGAGTAGTGGGAGGTATAAAAATTCAAGAAGTATGGATGGGAGTAGTAACTCACAGAGCATTGAGGATATACTGAATACAAGGACAACCAATGTTGGTCCACCAGAACAGAAGATCCTTCTGCTCTGTGGATCACCTGGTCTTGGAAAAACAACAATTGCCCATGTAGCTGCCAGGCACTGTGGATATCATGTAGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACTATTGAATCCAAAATCCTTGATGTTGTTCAAATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGAAGGCAAGGGTGCTGTGGAGGTTCTTTTGAAGATGGTTTCTGCTGAAACAAAGTCTGATGCTGGAAGGAAATCGTCAAAGAAGGGGTGGAAAAGAGCAACATTATCAAGACCTGTGATTTGCATTTGTAATGATTTATATGCACCTGCCTTAAGACCGTTACGTCAGATAGCCAAGGTTCATATGTTTGTTCAGCCAACAGTTGGTCGTGTGGTAAGCAGGCTTAAACATATATGTAACAAGGAGGGAATGAAAGCTAGTGCTATTGCGCTCACTGCTCTAGCGAATTACACAGAGTGTGATATACGCTCATGCTTGAATACTCTGCAATTTCTCTCCAAGAAAAAGGAAACCCTCAATATGTTTGATTTAGCTTCTCAAGTAGTTGGCCAGAAGGACATGTCAAAGAATGTTATAGACATCTGGAAGGAGATTTTCCATAGGAAAAGAAAGAAGTTGGAAAGAAATTCACCTAAAAGCAAGTCTTTTGAATTTGATTCCTTGTACTCCCTGATATCAAACCGAGGTGATAGTGACTTGATTTCGGATGGAATTCATGAAAATATTTTGCTTCTCAATTATCATGATCCCGTGATGCAAAAAACTGTCAAGTGCTTCGATATTCTTGGAGTTTTTGATGTATTGCATAAATTCATATGGCGTACACAACAAATGCCCCTTCATGTATATTTGCCGCCCATAGCAATTGGTGTACATCATATAGTAGCTCAAGTTCAGAAGCCAAGCATTGAGTGGCCAAAGTCTTATCAAAGGTATCGAACAATGATGTCTGAGAAGATTGACATTTTGAATACTTGGCACTACAAAGTCCCACCACATATTGCAAGGCACCTATCAGTTAGTTGCATTGTTGAAGATATAATTTCTCCGTTGTTGCATATTCTGTCTCCACCAACGATAAGACCGGTGGCATTACATCTCCTAGCTGAAAAGGAGAAGAACGATTTTTCTCAGCTAGTTAGTACAATGGTCTCTTACTCTATAACATACAAGACTACAAAGTCAGAAATGCAGCCTAATCACCTAAGCCATGAAGTAGCAAATGACATGGCTGTGTCTCTTGTTCCTCCAATCAATGACTTCATAAACTTTAAGGACTATGCCTCCAATCATCACACCCTTTCATTACCTATGAAGAAGGTTTTGCTCCATGAAGTTGAAAAACAGAGAATCTTGCAAGTTACAAAGGGAGATGAAGTTTTTGCTACTGGAACTATCAATGCTCAATCAACCAAAGCCAACCATGGAGCTGCAGCTGATAAGAAAACCACTGAAACAAATACTAACATTTTAGCGAGGCAGTTAAATGCAAATCCCAAATCAGATTCACCAAACTCGAATCTTAATAAAGTTCCATGTGATTTAGACAATGCAAAACTGCCAAACACGGGAAACAAGAAAAGGCCATCTAATGGTTTTTCAAGTTTCTTTGACAGGTTTAAAAAGCCAGGTGAGAAAGGCCTCAAAAGCAATGATGGCTCTCTGCAGAAAGAAGAAACTTTGAAGAAAGACCCATTCCCTTTACTATTCAAGTTTAATGAGGGCTTTACGAATGCGGTGAAAAGACCTGTCCGGATACGTGAATTTCTATGTTGA 2832 0.4227 MMNMDMDMPLPEELELLELERDYPDFDIPEPEQEQELQPQKQPQTHPQPESPDLVVLPEPQSNGHKRSRSDDPSPVRSLSEEKRVRVGDSAASEVDAVSNDDEDWLQYSPPPRGVRMEEEDRFVKEKELSRYAWEIHGECMPVTAPSGDRVYAKLNRIEGLELARKLDWRANSADLTLEPINALFERLEQEAIAKTMEASLEGQSYLDVPATQMVHEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSDIRSTSDDVLFALKRHSSVAQNQRPFNSKFSRRNRGAKWSSGRYKNSRSMDGSSNSQSIEDILNTRTTNVGPPEQKILLLCGSPGLGKTTIAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVLSDSRPKCLVVDEIDGALGEGKGAVEVLLKMVSAETKSDAGRKSSKKGWKRATLSRPVICICNDLYAPALRPLRQIAKVHMFVQPTVGRVVSRLKHICNKEGMKASAIALTALANYTECDIRSCLNTLQFLSKKKETLNMFDLASQVVGQKDMSKNVIDIWKEIFHRKRKKLERNSPKSKSFEFDSLYSLISNRGDSDLISDGIHENILLLNYHDPVMQKTVKCFDILGVFDVLHKFIWRTQQMPLHVYLPPIAIGVHHIVAQVQKPSIEWPKSYQRYRTMMSEKIDILNTWHYKVPPHIARHLSVSCIVEDIISPLLHILSPPTIRPVALHLLAEKEKNDFSQLVSTMVSYSITYKTTKSEMQPNHLSHEVANDMAVSLVPPINDFINFKDYASNHHTLSLPMKKVLLHEVEKQRILQVTKGDEVFATGTINAQSTKANHGAAADKKTTETNTNILARQLNANPKSDSPNSNLNKVPCDLDNAKLPNTGNKKRPSNGFSSFFDRFKKPGEKGLKSNDGSLQKEETLKKDPFPLLFKFNEGFTNAVKRPVRIREFLC* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1234 943 MobiDBLite consensus disorder prediction 869 888 - -
Ahy2g1234 943 MobiDBLite consensus disorder prediction 64 90 - -
Ahy2g1234 943 Gene3D - 471 541 - -
Ahy2g1234 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 528 IPR027417 -
Ahy2g1234 943 CDD AAA 329 461 - -
Ahy2g1234 943 Pfam ATPase family associated with various cellular activities (AAA) 334 450 IPR003959 GO:0005524|GO:0016887
Ahy2g1234 943 CDD HLD_clamp_RFC 471 526 - -
Ahy2g1234 943 SMART AAA_5 330 474 IPR003593 -
Ahy2g1234 943 MobiDBLite consensus disorder prediction 35 49 - -
Ahy2g1234 943 MobiDBLite consensus disorder prediction 281 313 - -
Ahy2g1234 943 MobiDBLite consensus disorder prediction 1 113 - -
Ahy2g1234 943 MobiDBLite consensus disorder prediction 14 28 - -
Ahy2g1234 943 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 942 - -
Ahy2g1234 943 Gene3D - 217 470 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1234 Ahy-Chr2 58605691 58627766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1234 331 518 Core DNA Replication Machinery Family AT5G22010 30.542 4.96e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1234 K11269 - gmx:100785041 1252.65