Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1220 ATGCAAGCCTTTGACTCCAATATGAGCATCAGTGATCATTTGCAACCCCAATCAACTAATAATGTAAAACCAAACTATGTTTCAAGCCACCCCAACAATATTCAAATTCCTCAAACTCAAGCCTCTTTCTCTATGCCTCCAACATCCTCAAACTTAAGCAACCGCAAGCCCTTCTTGAAGAACATCTCAATCCCTTCAACAAGACCAGCCCTCACAATGACCTTCACACAACAAAATGAAAGAACAACCGTTAATTGCAGCAACCAAAGTTTCTCGGAAAATTGTTATCCGAACGAGGATAAGCATTATAGAGGCGTTAGGAGACGACCATGGGGGAAGTTTGCCGCAGAGATTCGCGACCCGAATCGGAAAGGATCCAGGGTGTGGCTCGGAACATTTGACACAGCCATAGAAGCTGCTAGAGCATACGATAGAGCTGCTTTCAAGATGAGAGGAAGCAAAGCTATACTGAACTTCCCTATTGAAGTTGGAGAATACTCTAAAGAATGTTCAGTTTCTTGCTCAATAATGAAGGTTGGTGGGAAGAGGAGAAGAGAAAATGATGAAGAGGGTAGTGAAAATGTTGTGGAGAGTAACAATAAGAAGCAAGTGAAGAAAGAGGAGTGCTTTACGGCATGTCCTTTGACACCATCGTGTTGGAAAGGGTTTTGGGACACCGAAGTTATGGGAACAATCTTTAGTGTTCCTCCTTTGTCACCTTTATCTCCACTCATGGTTGTTTGA 744 0.4288 MQAFDSNMSISDHLQPQSTNNVKPNYVSSHPNNIQIPQTQASFSMPPTSSNLSNRKPFLKNISIPSTRPALTMTFTQQNERTTVNCSNQSFSENCYPNEDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAARAYDRAAFKMRGSKAILNFPIEVGEYSKECSVSCSIMKVGGKRRRENDEEGSENVVESNNKKQVKKEECFTACPLTPSCWKGFWDTEVMGTIFSVPPLSPLSPLMVV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1220 247 Gene3D AP2/ERF domain 101 163 IPR036955 GO:0003700|GO:0006355
Ahy2g1220 247 CDD AP2 101 161 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 236 - -
Ahy2g1220 247 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 PRINTS Ethylene responsive element binding protein signature 126 142 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 19 236 - -
Ahy2g1220 247 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 Pfam AP2 domain 102 152 IPR001471 GO:0003700|GO:0006355
Ahy2g1220 247 SUPERFAMILY DNA-binding domain 102 162 IPR016177 GO:0003677
Ahy2g1220 247 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1220 Ahy-Chr2 55868391 55869699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1220 48 240 AP2-EREBP Transcription Factor Family AT5G51190 50.754 7.46e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy2g1220 AP2 1.60E-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1220 K09286 - gmx:100795866 238.81