Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1159 ATGAACTCCAACAACACCACCTCCAATACTCAGTCAATGGTGACACCAACGCCAACTGCCACAACCGCCACCACCGCCACTGATGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAGTCCAGAGAGAGCTGGACTGACGAAGAACACGACAAGTTTCTAGAAGCTCTTCAGCTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGATCCAAAACAGTTATTCAGATCCGAAGCCATGCCCAAAAATACTTTTTGAAAGTTCAAAAGAATGGAACAGTAGCACATGTTCCTCCTCCTCGCCCTAAGCGCAAAGCCGCACATCCCTACCCACAAAAGGCATCAAAAAATGTTTTGATGGCACTGCCAGCATCCATTGCTTATGCTCCTTCGACAAATGCCCTTGCACCTGGGTATGCCACATGGGATGAAGCTTCTCTGCTGGTGAACACCGGATCAAATAAATCATTGACCTGTCAAGATGAACTCAGCAATCTTCATGGAAACGAAGCTGATATTGGATCGAAGGGGATAACACAGATTAGTAACAGCAGTCTTAATGGTGTCGGGAACTCAACTAGAAAGCTATTGTCTTCTGAGATACCAAAGCAAGGGAAACCAGCGCCAGTTATTCATGGTTTGCCAGATTTTGCCGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCTGATACAAATAACCATGTCGAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGAATTTGAGCCGATGAATGTATTATTGTCAACATATGATATCAATACCATGACAGTAGGAGTTACAGTAGGAGTTACAGCAGGAATTGATGTCAAGAAGCAACCGAATGACCTATCATGTCAAACTGTTTAA 936 0.4284 MNSNNTTSNTQSMVTPTPTATTATTATDASAKKVRKPYTITKSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLMALPASIAYAPSTNALAPGYATWDEASLLVNTGSNKSLTCQDELSNLHGNEADIGSKGITQISNSSLNGVGNSTRKLLSSEIPKQGKPAPVIHGLPDFAEVYSFIGSVFDPDTNNHVEKLKEMDPINFETVLLLMRNLTVNLSSPEFEPMNVLLSTYDINTMTVGVTVGVTAGIDVKKQPNDLSCQTV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1159 311 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Ahy2g1159 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 91 IPR006447 GO:0003677
Ahy2g1159 311 Gene3D - 47 94 - -
Ahy2g1159 311 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Ahy2g1159 311 PANTHER SWI/SNF COMPLEX-RELATED 14 295 - -
Ahy2g1159 311 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Ahy2g1159 311 SMART sant 43 91 IPR001005 -
Ahy2g1159 311 CDD SANT 46 89 IPR001005 -
Ahy2g1159 311 ProSiteProfiles SANT domain profile. 42 95 IPR017884 -
Ahy2g1159 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Ahy2g1159 311 MobiDBLite consensus disorder prediction 1 34 - -
Ahy2g1159 311 MobiDBLite consensus disorder prediction 1 29 - -
Ahy2g1159 311 PANTHER PROTEIN REVEILLE 8 14 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1159 Ahy-Chr2 43791556 43796223 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy2g1159 Myb_DNA-binding 1.90E-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1159 - - adu:107474168 575.859