Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1143 ATGTTGCAAGATGTTATTCACCCGCCACCACCGCCACTGTCGTCGTTGCCATCGCCAGCCCAACCTCCAACTGAGCAAATCTCCATTGAGGAGATTTCAAGCCCAATCAACGCCCGAATCTTCGAACTCTGCGATGACGAGTTGTTCCCGGAGGCGGGTCTTCAGAGCTCTGAGGTTACCTCAACCTCAAACTGTTGCTTTGAAGAGGCACAATACAAGACCAATACAGTCACCACACCAACTAGTACAACACAAGATATAACTGCCTCGGCAGCGGCCGTTGCGGCCAATAACAATAACAACAAACCACCGGACAGCTGTAACAACCTTTCGGTTATCTTTGACTCCCAAGAAGACCTTGACAATGACATCTCTGCTTCCATAGACTTCTCTTCTTCTCCAGCCGCAGCTTTTCCAGTTCCATCTCTTCTCCCAAATATCACAACTCAGCCGGAACAATTTGACTTCTCCTCGCCTTCGGTTCTCAAGGGTCTCCCTCATCAGTATCCAACTGACACTGCTACTACTGTTGTTGTTCCACCACTTATGGGGAATCCATTAGTATCTTCTGTTTTCGAAGATGAATGCATGTCTTCAATGGCTTCTTATGTTCCTATTAACTCTTCTTCCGCACCTTCTTGCTCTTATCTCAGCCCTGCTGGCTTAGGAGTGTTCATGCCTCCTCTTACTACCGCCTTATCTGCTGATTCTGCCTTGTTTGGTGGCAACATTCTACTCGGTTCGGAACTTCAAGCTCAAGAAATCGATTACCAGGGAGAAAATGGTGGAATATTTTGTACAGATTCAATTCAGAGGGTGTTTAATCCACCAGATCTTCAGACACTTAGTAGTGAGAGTCAGCAACTTGTACCTGGTTCTGGAGGCTCTGCCACTTTGGCACCAGAAATCTCAAACTTGGAGGACTCTACCTTAAAAGTTGGTAAACTTTCTGTTGAGCAAAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCATGCCGCAAAACTCTGGCTGATAGCCGACCCCGAGTTCGAGGAAGGTTTGCAAAGAATGATGACTTCGGAGAGAACCATAGACCAGCTTGTAGCAATCATGAAGAAGATGATGAAGAAGAAATAGTTGTGAAGGAAGATGATGGTTTGGTCGATTCCTCAGATATCTTTGCACATATAAGTGGTGTGAACTCCTTCAAGTGCAACTATTCTTCCATCCAATCCTGGATTTAA 1263 0.4497 MLQDVIHPPPPPLSSLPSPAQPPTEQISIEEISSPINARIFELCDDELFPEAGLQSSEVTSTSNCCFEEAQYKTNTVTTPTSTTQDITASAAAVAANNNNNKPPDSCNNLSVIFDSQEDLDNDISASIDFSSSPAAAFPVPSLLPNITTQPEQFDFSSPSVLKGLPHQYPTDTATTVVVPPLMGNPLVSSVFEDECMSSMASYVPINSSSAPSCSYLSPAGLGVFMPPLTTALSADSALFGGNILLGSELQAQEIDYQGENGGIFCTDSIQRVFNPPDLQTLSSESQQLVPGSGGSATLAPEISNLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPACSNHEEDDEEEIVVKEDDGLVDSSDIFAHISGVNSFKCNYSSIQSWI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1143 420 MobiDBLite consensus disorder prediction 1 19 - -
Ahy2g1143 420 PANTHER CCT MOTIF FAMILY PROTEIN 29 420 - -
Ahy2g1143 420 MobiDBLite consensus disorder prediction 360 378 - -
Ahy2g1143 420 MobiDBLite consensus disorder prediction 360 382 - -
Ahy2g1143 420 ProSiteProfiles CCT domain profile. 321 363 IPR010402 GO:0005515
Ahy2g1143 420 MobiDBLite consensus disorder prediction 1 23 - -
Ahy2g1143 420 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 29 420 - -
Ahy2g1143 420 Pfam CCT motif 321 363 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1143 Ahy-Chr2 40163772 40169855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1143 300 370 C2C2-CO-like Transcription Factor Family AT5G24930 39.437 3.16e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy2g1143 CCT 5.60E-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1143 - - gmx:100793417 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1286 12 44695433 44701789 Ahy2g1143 2 40163772 40169855 hybridization