Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1118 ATGCAGGCACTAATTATTTTAAAAAAGGGCAGTCAATTAGTAAAGTATTGTCGAAAAGGGAAGCCAAAAGTTGTTCCATTTAGGCTCTCAGCAGATGAAACAAAGCTGATTTGGCTTTCTCATGGAAAGGAAAAGAGTCTAAAGTTATCTTCTGTTTCACGCATAGTCCCTGGACAGAGAACAGCTGTCTTTAGAAGATATTTGCGCCCTGAAAAGGACTACCTGTCATTTTCACTTATTTACAAAAAAGGGGAACGATCACTTGATTTGATCTGCAAGGACAAAGCTGAGGTGGAGGTATGGTTTGCGGGCCTTAACGCATTAATATCTTCTGGACATAATAGTAAGCGCCCTAGAAGTGAGTTTACAGATGATTGTTCTGACTTTGCTCATAATGAACGTCCTTTTGGAGTGGCATTAGAGTTTGCTTCAACCATCGCCCGTGGCAGGTTTTCTGTGGATTCATCTTCTCATGAGTCTTCATTGGATTCAGCAGGATCAGATGTGGCACCAGAAGCTTCAAATATGCCAGTGAGGACAAGTGGAGGAGATGGTTCTTCTCGTATCAGTGTGTCAAGTGTTGGCTGTGCAAGTAGTGTATTGTCCGGACAAGACGACATAGAATCTCTCGGAGATGTCTTCATATGGGGAAGAATTTGGGCACATGGAGCCTCACATGATGGGTTTGGGAGTCAGGTCCTTTCGACAAAGAATGTGCTAACTCCTAAGTCATTAGAGTCTAATATTGTTATTGATGTTCATCAGATCGGGTGTGGTGTACATCACATTGCTCTCATTACAAGGCAAGGAGAGGTGTTTACATGGGGAGATGACTCTGGAGGGAGACTTGGTCATGGGCTTCATAAAAATCGTGGGAGACTGCAACTCGTGGAGTCTTTAGCTGTTACTAGTGTAGGTTTTGTTGCATGTGGTGAATACCATACTTGTGCTCTGTCTACACATGGTGATATATTTACTTGGGGTGATGACATACATAATGCAGGACTTCTTGGGCATGGCACTGATGTGAGCCATTGGATACCAAAGAAGATTGGAGGACCTTTAGATGGACTTCTCGTTGTATCTGTAGCATGTGGCACATGGCATTCAGCATTGGTTACCTCCATTGGAAAACTGTTTACCTTTGGTGATGGAAAATTCGGTGTCTTGGGCCATGGAGATCGAGATAGTGTATCATATCCGAAGGAGGTGCGCTTAATGTGTGGACAAAGGGCAATCAAAGTTGCATGTGGAGTATGGCACACTGCAGCAATTATAGAGGTTGTTGATCATTGTGGTACAAATGCATCTTCATCTAGGAAGCTTTTCACATGGGGCGATGGCGACCAATATCGTCTTGGCCATGCTAGCAAGAATACCTATCTTCAACCAACTTGTGTCTCTGCACTGAGTGACTATAGTTTTCATCAGGTAGCATGTGGGACCACTATGACTGTTGCCCTCACTGCCTCTGGTCAGGTCTTTACTATGGGAGAAACTAAATATGGTCAACTAGGAAATCCAATGTCCAATGGAAGAACACCAAGTCTGGTCAAAGATAATTTAGTGGGTGAGGTTGTAGAGGACATATCATGTGGTTCACATCATGTGGCTGTGGTGACTTCAAAAGGTGAACTATATACATGGGGCAGAGGTGCCAATGGAAGATTGGGACATGGAGACACAGATGACCATAACACACCAATTTTGGTTGAAGCCTTTAGAGACAGACACGTAAAGCATGTTTCGTGTGGCTCAAGCTTTACATTTTGTGTATGCATACATAAGTGGATTTCTGGAGCTGACCAATCACTTTGCTCGGGTTGCCGGCAACCATTTGGTTTTACAAGAAAAAGGCATAATTGTTATAATTGTGGATTGGTGTATTGCCATCCTTGTAGCTCCAAAAAGTCAATAAGAGCAGCATTGGCTCCAACACCTAGCAAACCACATCGTGTGTGTGACTCTTGTTATTCTAAGCTTAAAGTTCCTGAGACTAGCAGTGCTTCTTCCACTTATAATAAGGATGTTACTCGTGCTCATAGAAAGGAAAGATTTGATACAAGAGAGGCAAAGAATGCAAAAATTCTCTCATCTCCCAGCACCGATCCTGTAAAATACTTTGAGACATTGACGGGTAAGAATATAACTTTGCATGACTCTTCTTCCACAGTCCGAGTTGCTCAAGCTCCTTTGCGTATTCCAATGGATAATGTGTTTCCAAGTTCATCTAGTGTCATGCAGAATGCTTCTGTTCCCGTTACACAATCAACTCAACCTCCAACTCCACCTACACCAAGTAATTTAAGACCTCCATCACCGTATGCAAGGAGACCAAGTCCACCACGTTCTAGTTCCCCCGGATTTTCAAGAAGCCTCATTGATAGTTTAAAGAAGACAAATGATCTTTTGAATCAAGAAGTCTCTAAATTAAAAAACCAAAATCAAAATTTGAAGCAGAAGAGTGACATGCAAGATATCAAGATTCGGGAACTTGAGAAAAAGATTGAGGAATCTACCTCATTGGTTAAAGAGGAATCATCTAAGCATAGAATACTGAAGGAATATCTCCAGTGCATGACAGATCAGTTGAGGGAAGTGACTGAGAACTTGCCACCAGTTCCTGACTATGAATCTTTAATTACCTTGCATACTCATGCTGAGACATTTCTTAAAGAAAATATGGAATTCAAATCCTTATTTGCATCAACGTTGGAATCAAGGTCACAAAGTGCAAATGATTTACATGGCGCACACAATGACTCTCGTAAACAGCCAGAACAAAAAATGGAAGAAACCGTTGATGCTGCTGGAGCTGGTTCATCTATGAATGGAGGAAATGCTCTTCAAGAAAGCAATGAGTCATCTTTGTTGAGTCCAAATAAGCCAAGATCATCTAATCCACACAGACCCGGGAATGAGAAACAAGAAGAAATAGTGACCATCGAACAATTTGAACGTGGTGTTTATGTAACATTTGTAGAATTACCTTCTGGTGGAAAAGTTTTTAAACGAATTAGATTCAGTAAGCGCAAATTTGACGAGACTCAAGCAGCAGAATGGTGGAACCAAAACAAAGATAGGGTGCTTATGAAATATAGTCCAGAATCTGTACAGGATGCAGCTACTGGCTCATCTATTAGCCCCACCAGAAGTTGA 3159 0.4182 MQALIILKKGSQLVKYCRKGKPKVVPFRLSADETKLIWLSHGKEKSLKLSSVSRIVPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDKAEVEVWFAGLNALISSGHNSKRPRSEFTDDCSDFAHNERPFGVALEFASTIARGRFSVDSSSHESSLDSAGSDVAPEASNMPVRTSGGDGSSRISVSSVGCASSVLSGQDDIESLGDVFIWGRIWAHGASHDGFGSQVLSTKNVLTPKSLESNIVIDVHQIGCGVHHIALITRQGEVFTWGDDSGGRLGHGLHKNRGRLQLVESLAVTSVGFVACGEYHTCALSTHGDIFTWGDDIHNAGLLGHGTDVSHWIPKKIGGPLDGLLVVSVACGTWHSALVTSIGKLFTFGDGKFGVLGHGDRDSVSYPKEVRLMCGQRAIKVACGVWHTAAIIEVVDHCGTNASSSRKLFTWGDGDQYRLGHASKNTYLQPTCVSALSDYSFHQVACGTTMTVALTASGQVFTMGETKYGQLGNPMSNGRTPSLVKDNLVGEVVEDISCGSHHVAVVTSKGELYTWGRGANGRLGHGDTDDHNTPILVEAFRDRHVKHVSCGSSFTFCVCIHKWISGADQSLCSGCRQPFGFTRKRHNCYNCGLVYCHPCSSKKSIRAALAPTPSKPHRVCDSCYSKLKVPETSSASSTYNKDVTRAHRKERFDTREAKNAKILSSPSTDPVKYFETLTGKNITLHDSSSTVRVAQAPLRIPMDNVFPSSSSVMQNASVPVTQSTQPPTPPTPSNLRPPSPYARRPSPPRSSSPGFSRSLIDSLKKTNDLLNQEVSKLKNQNQNLKQKSDMQDIKIRELEKKIEESTSLVKEESSKHRILKEYLQCMTDQLREVTENLPPVPDYESLITLHTHAETFLKENMEFKSLFASTLESRSQSANDLHGAHNDSRKQPEQKMEETVDAAGAGSSMNGGNALQESNESSLLSPNKPRSSNPHRPGNEKQEEIVTIEQFERGVYVTFVELPSGGKVFKRIRFSKRKFDETQAAEWWNQNKDRVLMKYSPESVQDAATGSSISPTRS* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1118 1052 SUPERFAMILY RCC1/BLIP-II 211 597 IPR009091 -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 747 792 - -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 322 376 IPR000408 -
Ahy2g1118 1052 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 6 1038 - -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 377 428 IPR000408 -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 492 543 IPR000408 -
Ahy2g1118 1052 PANTHER CHROMOSOME CONDENSATION REGULATOR RCC1 REPEAT PROTEIN 6 1038 - -
Ahy2g1118 1052 Pfam FYVE zinc finger 596 661 IPR000306 GO:0046872
Ahy2g1118 1052 Gene3D - 435 608 IPR009091 -
Ahy2g1118 1052 Gene3D - 154 434 IPR009091 -
Ahy2g1118 1052 Pfam Transcription factor regulating root and shoot growth via Pin3 982 1033 IPR013591 -
Ahy2g1118 1052 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 609 668 IPR013083 -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 270 321 IPR000408 -
Ahy2g1118 1052 SMART fyve_4 592 663 IPR000306 GO:0046872
Ahy2g1118 1052 Coils Coil 794 849 - -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 757 781 - -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 440 491 IPR000408 -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 943 967 - -
Ahy2g1118 1052 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 415 425 IPR000408 -
Ahy2g1118 1052 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 256 266 IPR000408 -
Ahy2g1118 1052 ProSiteProfiles BRX domain profile. 979 1034 IPR013591 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 442 488 IPR000408 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 270 318 IPR000408 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 491 540 IPR000408 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 377 425 IPR000408 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 543 592 IPR000408 -
Ahy2g1118 1052 Pfam Regulator of chromosome condensation (RCC1) repeat 322 372 IPR000408 -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 911 979 - -
Ahy2g1118 1052 CDD PH_PLC_plant-like 2 110 - -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 379 393 IPR000408 -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 272 288 IPR000408 -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 322 338 IPR000408 -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 481 499 IPR000408 -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 363 379 IPR000408 -
Ahy2g1118 1052 PRINTS Chromosome condensation regulator RCC1 signature 539 560 IPR000408 -
Ahy2g1118 1052 Gene3D - 1 118 IPR011993 -
Ahy2g1118 1052 SUPERFAMILY PH domain-like 2 109 - -
Ahy2g1118 1052 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 600 662 IPR017455 -
Ahy2g1118 1052 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 544 595 IPR000408 -
Ahy2g1118 1052 Pfam Pleckstrin homology domain 4 109 IPR001849 -
Ahy2g1118 1052 SUPERFAMILY FYVE/PHD zinc finger 596 667 IPR011011 -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 158 187 - -
Ahy2g1118 1052 MobiDBLite consensus disorder prediction 917 931 - -
Ahy2g1118 1052 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 363 373 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1118 Ahy-Chr2 36682511 36687591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1118 982 1034 Major Intrinsic Protein MIP AT1G31880 47.170 1.41e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1118 - - gmx:100812689 1292.72