Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1088 ATGGGTTGGATTCCATGTTCTGGAAATTCAAATGCTAAGAAGAAGGTGAAGAAGAAGATGGAAGTGGAGGAAAGTGTGAAGCCTGATCCAATCAAAGGGAAATTGAAGAGGAACTCGTCCATTAATTCGGCAGATTCATCTAAAAATGGGAATACTGATCACATTGCTGCACAGACATTCTCCTTCCGTGAGTTGGCAACTGCAACTCGACATTTTCGGGCAGAATGTCTTTTGGGTGAGGGAGGCTTTGGTAGAGTATACAAGGGGCGTTTGGAAAGTATTAATCAGATTGTTGCAATTAAACAACTTGACCGAAATGGCCTGCAAGGGAATAGAGAGTTCCTAGTTGAAGTGTTGATGTTAAGTCTTCTTCATCACCCGAACCTTGTCAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGACTTCTCGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTGCTCCTGGCAAGGAACGACTAGATTGGAACACACGAATGAAAATAGCTGCCGGAGCAGCAAGCGGATTGGAATATCTTCATGACAAAGCTAACCCTCCTGTTATATACCGAGATTTAAAGTGCTCCAATATTTTGCTCAGTGAAGGGTATCATCCCAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAACACCCATGTATCAACGAGGGTTATGGGCACCTACGGATATTGTGCTCCCGAGTATGCAATGACAGGTCAGCTGACTCTGAAATCAGATGTTTATAGCTTCGGTGTAGTTCTTCTGGAAATCATTACAGGAAGGAAGGCAATTGACAATTCAAAATCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAGGACCGAAGAAAATTTGCGCAAATGGCCGATCCAATGCTTCAAGGTCAATATCCTCCAAGAGGACTCTACCAGGCCCTTGCTGTGGCGGCAATGTGTGTTCAGGAGCAGGCCAACATGCGTCCAGTTATAGCCGATGTTGTTACAGCTTTGAGTTACCTTGCTTCCCAAAGATATGACCCGCATACACAAACAGCACAAAATTCTCGCTTCGCTCCTGGCACTCCTCCTAGAACCAAGAGGGGACACTGA 1137 0.4433 MGWIPCSGNSNAKKKVKKKMEVEESVKPDPIKGKLKRNSSINSADSSKNGNTDHIAAQTFSFRELATATRHFRAECLLGEGGFGRVYKGRLESINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDVAPGKERLDWNTRMKIAAGAASGLEYLHDKANPPVIYRDLKCSNILLSEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFAQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPHTQTAQNSRFAPGTPPRTKRGH* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1088 378 MobiDBLite consensus disorder prediction 36 52 - -
Ahy2g1088 378 MobiDBLite consensus disorder prediction 1 52 - -
Ahy2g1088 378 SMART serkin_6 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1088 378 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Ahy2g1088 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Ahy2g1088 378 CDD STKc_IRAK 78 346 - -
Ahy2g1088 378 MobiDBLite consensus disorder prediction 356 378 - -
Ahy2g1088 378 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Ahy2g1088 378 Gene3D Transferase(Phosphotransferase) domain 1 149 367 - -
Ahy2g1088 378 Pfam Protein tyrosine and serine/threonine kinase 76 345 IPR001245 GO:0004672|GO:0006468
Ahy2g1088 378 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Ahy2g1088 378 ProSiteProfiles Protein kinase domain profile. 72 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy2g1088 378 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 376 - -
Ahy2g1088 378 MobiDBLite consensus disorder prediction 14 34 - -
Ahy2g1088 378 PANTHER OS07G0668900 PROTEIN 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1088 Ahy-Chr2 32539401 32543709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1088 52 351 Glycoside Hydrolase AT3G07070 72.000 1.26e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Ahy2g1088 PK_Tyr_Ser-Thr 2.50E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1088 - - gmx:100776041 683.33