Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1078 ATGTCCATAAATGAGGATGATGTGAAGAATGATTCTGATAATAATTTGGGTGATGATTTCGATTATCAACCGAATACAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTAAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATTAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCATGCAGCTTGTTTGTAATAAAGAAGGGTGTAAGAATGTGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTATGGCTGCGGTATATGGAAGATATCATGTTTTGTGGAATCTCACAACCACGATCTGATGCCACCCGCCCACCCCAATTTGCGCATCTGGTTCCAGCCAATCGTTGTCTCAGTGTCACTGATAAAGTCCAAGTAG 567 0.4215 MSINEDDVKNDSDNNLGDDFDYQPNTEDDAEDDDVDSLDSTSKSKEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVIRKDDVVRDNQGRIISMQLVCNKEGCKNVRYLDLDDRSREARSLTRTKCPARLRVKLDYGCGIWKISCFVESHNHDLMPPAHPNLRIWFQPIVVSVSLIKSK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1078 188 MobiDBLite consensus disorder prediction 1 16 - -
Ahy2g1078 188 MobiDBLite consensus disorder prediction 1 41 - -
Ahy2g1078 188 MobiDBLite consensus disorder prediction 22 36 - -
Ahy2g1078 188 Pfam FAR1 DNA-binding domain 74 165 IPR004330 -
Ahy2g1078 188 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1078 Ahy-Chr2 31562448 31563014 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy2g1078 FAR1 7.40E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1078 - - adu:107460934 313.153