Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1074 ATGGGTAACTCTCACTCACATCGCAAACACCGTAACTCCCTCTCTCAAAACAATAACTCTTCTTCTTCTATTGCTACTCCTCCACACTATAGATATGGTGCTCATCATTATCCAAAACAACAACACTGTAATAGGACGATGGTGAGCAGCAAGATTTCTTTGCCTTACGGGCGCGTGGACACCACGCTCCGAGAACTCGCTGCCAAGGCCGAAGGCTTCGGACGCTTCGCCATCGGCGGCCTCCATGGTCCGCTATACCATGTCACTAATCTCGCAGATGATGGACCAGGATCACTACGCGATGCATGTCGTAGAAAAGAACCATTATGGATTGTATTTGAGGTTTCAGGCACAATTCATCTGTCATCGTATTTGAATGTATCATCTTACAAGACCATTGACAGCCGGGGCCAAAGGATTAAACTCACCGGTAAAGGGTTGCGGCTGAAGGAATGCGAGCATGTAATAGTGTGCAATTTAGAGTTTGAAGGAGGCAGAGGGCCTGATGTTGATGCCATTCAAATCAAGCCTAACTCAAAGCACATATGGATAGATCGTTGTACTCTCAGTGATTTCGAAGATGGGCTGATAGACATCACCAGAGAAAGCACAGATATTACAATTTCAAGGTGTCATTTTTCTAAGCATGACAAAACAATTCTCATTGGAGCAGATCCCTCACATGTTGGTGATAGATGCATAAGGGTCACCATTCATCATTGCTTCTTCGATGGGACTCGACAGAGGCATCCTCGCGTTCGATTTGCAAAAGTTCATCTGTATAACAATTATACCAGAAACTGGGGCATATATGCTGCTTGTGCGAGTGTGGAGTCCCAGATATTCTCGCAACATAATATTTATGAAGCAGGGCAGAAGAAGGTAGCATTCAAGTACCTTTCTGAGAAGGCAGCAGACAAGGGAGCAGAAGCAAGTGGCCGCATAATATCCGAAGGAGATTTGTTTATAAATGGAACACAATCAGGGCTAATAGCATCTAACAATCTTGAATGCAACAATTTTCATCCTAGGGAACACTATCCGGCATGGACGGTGGAACCTCCTTCACATGATCTAAAACAGGTTCTTCAGCATTGCACTGGATGGCAATCTATGGCGAGGCCATTAGACCAAACGGTTGAACACGGTGCACATGATGAAGCAGTACCTATTTATCCATTCCAAACTCACAGCATTGTAGCCAGTTTGCCTTATGCACGAGTGGACTCCTCCCTCCGAGCACTTGCTGGCTCGGCCGAGGGATTTGGACACTCTGCCATTGGTGGCCTCCGTGGTCCCCTTTATCATGTAACAACTCTAGCAGATGATGGACCGGGGTCGCTGCGTGACGCATGTCGCAGAAAAGATCCTTTGTGGATTGTATTTCAAGTTTCAGGCACAATTCATCTGTCTACATTTTTGAGTGTATCATCTTATAAGACCATCGATGGCCGGGGCCGAAGGATTAAACTCACCGGAAAAGGATTGCGGCTGAAGGAATGTGAGCATGTAATAATTTGTAATTTAGAGTTTGAAGGAGGCAGAGGGCCTGATAGTGATGCCATTCAGATCAAGCCTAATTCGAAGCACATATGGATAGATCGTTGCAGCCTCAGTGATTTCGATGATGGACTCATAGACATCACTAGAGAAAGCACGGATATTACCATTTCAAGGTGTCATTTTTCTAAGCACAACAAAACAATTCTCATCGGAGCAGATCCCTCGCATGTTGGGGATAGGTGCATAAGGGTCACCATTCACCACTGCTTTTTCGATGAGACTCGACAGAGGCATCCTCGTGTTAGATTTGCAAACGTACATCTTTACAATAATTATAGCAGAAACTGGGGTATATATGCTGTTTGTGCAAGTGTGGAATCACAGATATTCTCACAACATAATATCTATGAAGCAGGGCAGAAGAAGGTGGCATTTAAGTATCTTTCTGAAAAGGCAGCAGACAAGGGAGAAGAAGCAAGTGGCCGCATAATTTCTGAAGGAGACATGTTTATAAATGGAGCACAATCAGGGCTAATGACAGAGAACAATGATGGAAGTAACATTTTTCATCCAAGTGAATATTATCCCACTTGGACAATGGAACCTTCTTCAGATAATCTAAAACAGGTTCTTCAGTACTTCACTGGATGGCAATCTATTGCCAGGCCAGAAGATTAA 2181 0.4434 MGNSHSHRKHRNSLSQNNNSSSSIATPPHYRYGAHHYPKQQHCNRTMVSSKISLPYGRVDTTLRELAAKAEGFGRFAIGGLHGPLYHVTNLADDGPGSLRDACRRKEPLWIVFEVSGTIHLSSYLNVSSYKTIDSRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGPDVDAIQIKPNSKHIWIDRCTLSDFEDGLIDITRESTDITISRCHFSKHDKTILIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAACASVESQIFSQHNIYEAGQKKVAFKYLSEKAADKGAEASGRIISEGDLFINGTQSGLIASNNLECNNFHPREHYPAWTVEPPSHDLKQVLQHCTGWQSMARPLDQTVEHGAHDEAVPIYPFQTHSIVASLPYARVDSSLRALAGSAEGFGHSAIGGLRGPLYHVTTLADDGPGSLRDACRRKDPLWIVFQVSGTIHLSTFLSVSSYKTIDGRGRRIKLTGKGLRLKECEHVIICNLEFEGGRGPDSDAIQIKPNSKHIWIDRCSLSDFDDGLIDITRESTDITISRCHFSKHNKTILIGADPSHVGDRCIRVTIHHCFFDETRQRHPRVRFANVHLYNNYSRNWGIYAVCASVESQIFSQHNIYEAGQKKVAFKYLSEKAADKGEEASGRIISEGDMFINGAQSGLMTENNDGSNIFHPSEYYPTWTMEPSSDNLKQVLQYFTGWQSIARPED* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1074 726 SUPERFAMILY Pectin lyase-like 68 373 IPR011050 -
Ahy2g1074 726 SMART pbh1 152 177 IPR006626 -
Ahy2g1074 726 SMART pbh1 528 549 IPR006626 -
Ahy2g1074 726 SMART pbh1 203 224 IPR006626 -
Ahy2g1074 726 SMART pbh1 604 626 IPR006626 -
Ahy2g1074 726 SMART pbh1 552 573 IPR006626 -
Ahy2g1074 726 SMART pbh1 501 526 IPR006626 -
Ahy2g1074 726 SMART pbh1 179 200 IPR006626 -
Ahy2g1074 726 MobiDBLite consensus disorder prediction 13 27 - -
Ahy2g1074 726 SMART amb_all 445 643 IPR002022 -
Ahy2g1074 726 SMART amb_all 81 294 IPR002022 -
Ahy2g1074 726 Pfam Pectate lyase 126 287 IPR002022 -
Ahy2g1074 726 Pfam Pectate lyase 474 636 IPR002022 -
Ahy2g1074 726 SUPERFAMILY Pectin lyase-like 416 720 IPR011050 -
Ahy2g1074 726 MobiDBLite consensus disorder prediction 1 38 - -
Ahy2g1074 726 Gene3D - 405 715 IPR012334 -
Ahy2g1074 726 Gene3D - 56 354 IPR012334 -
Ahy2g1074 726 PRINTS Pollen allergen Amb family signature 620 639 IPR018082 -
Ahy2g1074 726 PRINTS Pollen allergen Amb family signature 473 489 IPR018082 -
Ahy2g1074 726 PRINTS Pollen allergen Amb family signature 418 435 IPR018082 -
Ahy2g1074 726 PANTHER PECTATE LYASE 18-RELATED 50 375 IPR045032 GO:0030570
Ahy2g1074 726 PANTHER PECTATE LYASE 18-RELATED 399 723 IPR045032 GO:0030570
Ahy2g1074 726 PANTHER PECTATE LYASE 50 375 - -
Ahy2g1074 726 PANTHER PECTATE LYASE 399 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1074 Ahy-Chr2 31047937 31054293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1074 440 726 Polysaccharide Lyase AT3G55140 73.519 7.95e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1074 K01728 - ecad:122607709 1046.57