Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1033 ATGTGGGATTTAGACATTAAAGATATAAACTCGCCGAAGCAAATTCGTGAGATTAAGGACTTCCTCCTCACAGCCCATAGGAAGGATGTGCACTATGTGAAAATTAAGCGGAGCAGAGATGTGATCAAGTTTAAAGTTTGTTGCTCCAAGTACCTGTACACCCGTTGTGCTTTTGACCCAGAGAAAGCTGATAAATTGAAGCAATCACTCCCTTCCAGGTTAGTTTTAAGAAATTTTATTATTGATATATTATGA 255 0.3804 MWDLDIKDINSPKQIREIKDFLLTAHRKDVHYVKIKRSRDVIKFKVCCSKYLYTRCAFDPEKADKLKQSLPSRLVLRNFIIDIL* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1033 84 PANTHER 60S RIBOSOMAL PROTEIN L38 12 76 IPR002675 GO:0003735|GO:0005840|GO:0006412
Ahy2g1033 84 PANTHER 60S RIBOSOMAL PROTEIN L38 12 76 - -
Ahy2g1033 84 Pfam Ribosomal L38e protein family 12 74 IPR002675 GO:0003735|GO:0005840|GO:0006412
Ahy2g1033 84 Gene3D - 11 79 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1033 Ahy-Chr2 25815131 25815617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1033 12 79 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 70.588 8.68e-29 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1033 K02923 - hbr:110639085 106.301