Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0957 ATGGCGCTATGGATGGAAAACGGTTCAGAGCCACTAACAGAAGCCGAGAAGGCAGACCTTGAAGCCATTGCTGCCATCAAAGAATCCGCAGCCATTGAACTCAAGGAAAAGGGTAACGAGTATGTGAAGAAGGGTAAGAAGCATTACTCTGAAGCAATTGATTGCTACACAAGGGCGATTAATCAGAAAGCATTGAGTGATTCTGAGAGCTCTGTTCTTTTTGCGAACAGAGCGCATGTCAATTTGCTTCTTGGGAACCATAGGCGTGCCCTCACTGATGCTCAACAAGCACTCAACTTGTCCCCTTCCAACATAAAGGCAATTTATAGGGCTGTCAAAGCATCTCTATCACTGAATTTATTGGCTGAAGCACAAGACTTCTGCCGAAAGGGTCTTGAGTTGGACCCCAATAATGAGGAATTTAAGAGGCTTGACCAACAGATTCGTACGAAGATATCGGAGAAGGAGAAGCGTGAGGCTGAAGTCTCCAAAGCCATATTGGAGGCAAAAGAACTTGTGTCTGCAATAGAAAATAGAGGCTTGAAGATTGGAAAGGCAATATATCGAGAACTCACCGGGTTAAAGAAACCGGTGTTAGACAAAAATAATATCCTTCATTGGCCTGTCCTTCTTCTTTATGCAGAGGTTATGTCCAGTGATTTCATTGAGGATTTCTGTGAGACTGACATGCTTTCAGTCCACCTTGATATGATGTTTTCAGCAGACCAACCACTCCCATGGGATGTTGAAAACAATTACAAACGTGATTTTGTTGAATTATACTATGAGGCTGGCTCTGGAGTTCGTCTATCAAAGGAGAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCTTCTCATGTTGGTGATGAAGAGAAAGATGCAGTTGAGGATTTTAAACACAGTGCAGGTTCCCCAAAATGGATCAAAGTAAATGAGAAGAAAATGCTCCAAGATATCCTCAAAGAACCTAATTTCGTAATCCCAGAAATCCCAGTCTTCTATGTTGTTTCCAAGCAATCCAGCTTTTATAGCAAGTTCAAATCTGGAAAATGGGCTCCTCCAAGCATATGA 1074 0.4227 MALWMENGSEPLTEAEKADLEAIAAIKESAAIELKEKGNEYVKKGKKHYSEAIDCYTRAINQKALSDSESSVLFANRAHVNLLLGNHRRALTDAQQALNLSPSNIKAIYRAVKASLSLNLLAEAQDFCRKGLELDPNNEEFKRLDQQIRTKISEKEKREAEVSKAILEAKELVSAIENRGLKIGKAIYRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMLSVHLDMMFSADQPLPWDVENNYKRDFVELYYEAGSGVRLSKEKLLHCLLEGTAASHVGDEEKDAVEDFKHSAGSPKWIKVNEKKMLQDILKEPNFVIPEIPVFYVVSKQSSFYSKFKSGKWAPPSI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0957 357 SUPERFAMILY TPR-like 22 162 IPR011990 GO:0005515
Ahy2g0957 357 SMART tpr_5 105 138 IPR019734 GO:0005515
Ahy2g0957 357 SMART tpr_5 31 66 IPR019734 GO:0005515
Ahy2g0957 357 SMART tpr_5 71 104 IPR019734 GO:0005515
Ahy2g0957 357 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Ahy2g0957 357 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Ahy2g0957 357 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Ahy2g0957 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 353 - -
Ahy2g0957 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 353 - -
Ahy2g0957 357 Pfam Tetratricopeptide repeat 106 138 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0957 Ahy-Chr2 21587995 21592629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0957 30 160 Calmodulin-binding Proteins AT3G25230 33.099 1.61e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0957 K24927 - gmx:100783179 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1039 12 23932299 23936809 Ahy2g0957 2 21587995 21592629 hybridization