Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0956 AATCCGGATCGACCCGGTCGGTTTTCAGAAAAATCGGTGACTCGGCCGGTTTATATCGCCCGGCCGGTTTATATCCGGATCCGACTTTCCCGCTTTCCCGCTCTGAACTCTGAAGCCCTAATTGCGGAAGATCACCCGCAGCCCTCAACGCTCTCTCCTCTCTGGACTCTCTTTCTCAGTTTCTCGTCACTCTCTCCGACGAGCTCAAGCTCTCGTCAGCTCGTCTCATCTCCGGTCTCTCACCTCTCGTCTCCGATCTGTCAAGCTCTCGTCAGCTCAAGCACTCCCTTCCCTGCGCTCGCTTTGCCGGCGGCAGAAGCAGACGGAACCGGCATCTGGTCCCTCGGGCGGTGGTCGTCGTCGTCTTCTTGCTTCTCACTGTCTCGGTCTCGCACCTGGTCGTCGTTGTCGCTATCTGTTATCAGTCTCGCACCCAGTCGCGCACCTTCACCGCTATCGTCGTCGCCGTGGGACTGGTCATCGTCGTCGCTCTCTGTCTCGTCATCGTCTCGCACTCGGACGCGCGCCTTCCCTGTGCTCTTCGTCGCCGGTAGCAGAGGCAGCCGGTCCCGGTGGACTGGTCTTTGTTGTCGTCTTCTTGCTTCTCCCTTCCCGTCAGCTTCCTTCGCCGCAACCCGATTTGGGCAAGGTGGCAAGCTGGTTAGAGCTGCTGGAACTTGTGCAAAAATCCTGAAAGAACCTACATCAAAATACTGTCTTATCCAGCTCCCCTCGGGTGTTAAAAAAATGATTGATTCTCGTTGCAGAGCCACCGTTGGTACTGTCTCAAATCCAAGCCATGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCGGTGGCTTGGCCGGAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTGGACCATCCTCATGGTGGAGGAGAGGGCAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGGAGGAAGTAG 1014 0.5651 NPDRPGRFSEKSVTRPVYIARPVYIRIRLSRFPALNSEALIAEDHPQPSTLSPLWTLFLSFSSLSPTSSSSRQLVSSPVSHLSSPICQALVSSSTPFPALALPAAEADGTGIWSLGRWSSSSSCFSLSRSRTWSSLSLSVISLAPSRAPSPLSSSPWDWSSSSLSVSSSSRTRTRAFPVLFVAGSRGSRSRWTGLCCRLLASPFPSASFAATRFGQGGKLVRAAGTCAKILKEPTSKYCLIQLPSGVKKMIDSRCRATVGTVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0956 337 SUPERFAMILY Translation proteins SH3-like domain 213 326 IPR008991 -
Ahy2g0956 337 ProSitePatterns Ribosomal protein L2 signature. 285 296 IPR022671 GO:0003735|GO:0005840|GO:0006412
Ahy2g0956 337 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 213 337 - -
Ahy2g0956 337 Gene3D Ribosomal protein L2, domain 3 264 337 IPR014726 -
Ahy2g0956 337 SMART Ribosomal_L2_C_2 191 323 IPR022669 GO:0003735|GO:0005840|GO:0006412
Ahy2g0956 337 Pfam Ribosomal Proteins L2, C-terminal domain 213 321 IPR022669 GO:0003735|GO:0005840|GO:0006412
Ahy2g0956 337 Gene3D - 210 263 IPR014722 -
Ahy2g0956 337 MobiDBLite consensus disorder prediction 290 337 - -
Ahy2g0956 337 PANTHER RIBOSOMAL PROTEIN L2 213 337 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0956 Ahy-Chr2 21584328 21587997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0956 213 303 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 45.361 5.24e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0956 - - ahf:112722953 469.929