Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0875 ATGACAAAAATTTCCGGCGGGACGGGTACCCGCAGGGATTTATCCATCAGAGAGCAGATATGGGGAGATAGACAGAGAGTAAGAACTAAGCTGAGACCTGAGACTCTCATTTCCACTCCTCCACAAACCCTTAGCCCCTCCTGCCTCCTTCCCGCTGACCGCCGACCGTCGTCGCCGCCTTCCACCCTCTGGTCTCTCAGCGCCGCCTCCCACCCCAAACTCAGCAACGTCGTCGTCTTTTCCTGGTCGTGGTCGTCATCTTCTCCTGTTCGCGTTGCTGGTCTTCGCTGGACGTTAGTCTTCCTTCCCCTTTTCTCCATCAGGTTCAGAGGCAATTTAATTTCTAATAAGGATTTTGATACGAGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGTTCCAACTTGCTGCTAGGATTATTATTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGTTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCTGACCATTGCCTTCTGTGACACCGATTCTCCGATGCACTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGATTGTCTGTTTTGGTTATTAGCAAGGATGGCTCTACATATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGAAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGAGAATGGGGGGCTGTTACAGCTAAACAATCCTGGACTGAACTAGTTCCTCAGCAACCCATTCCAGCTGCTCCTGTTAACTGCGCCTCAGACGCCGGTGATTGGGAGCCAGTTCTAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCCCTGGCTGGGACTAG 1128 0.4982 MTKISGGTGTRRDLSIREQIWGDRQRVRTKLRPETLISTPPQTLSPSCLLPADRRPSSPPSTLWSLSAASHPKLSNVVVFSWSWSSSSPVRVAGLRWTLVFLPLFSIRFRGNLISNKDFDTSIYIINLGKTWEKFQLAARIIIAIENPQDIIVQSARPYGQRVVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNILTIAFCDTDSPMHYVDVGIPANNKGKHSIDCLFWLLARMALHMRGTIRPGLKWDVMVDLFFYREPEEAKKQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAKQSWTELVPQQPIPAAPVNCASDAGDWEPVLAPQASVPAPGGVAPPGWD* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0875 375 SUPERFAMILY Ribosomal protein S2 121 277 IPR023591 -
Ahy2g0875 375 TIGRFAM uS2_euk_arch: ribosomal protein uS2 122 283 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0875 375 Pfam Ribosomal protein S2 190 257 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PRINTS Ribosomal protein S2 signature 122 131 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PRINTS Ribosomal protein S2 signature 213 224 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PRINTS Ribosomal protein S2 signature 196 213 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PRINTS Ribosomal protein S2 signature 234 248 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PRINTS Ribosomal protein S2 signature 171 188 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 Gene3D - 114 296 - -
Ahy2g0875 375 MobiDBLite consensus disorder prediction 32 56 - -
Ahy2g0875 375 Hamap 40S ribosomal protein SA [rps-0]. 85 324 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0875 375 PANTHER 40S RIBOSOMAL PROTEIN SA 122 367 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0875 375 CDD RPS2 123 260 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0875 375 PANTHER 40S RIBOSOMAL PROTEIN SA 122 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0875 Ahy-Chr2 17234401 17238079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0875 117 367 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 67.729 2.67e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0875 K02998 - gmx:100818292 359.762