Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy2g0875 | ATGACAAAAATTTCCGGCGGGACGGGTACCCGCAGGGATTTATCCATCAGAGAGCAGATATGGGGAGATAGACAGAGAGTAAGAACTAAGCTGAGACCTGAGACTCTCATTTCCACTCCTCCACAAACCCTTAGCCCCTCCTGCCTCCTTCCCGCTGACCGCCGACCGTCGTCGCCGCCTTCCACCCTCTGGTCTCTCAGCGCCGCCTCCCACCCCAAACTCAGCAACGTCGTCGTCTTTTCCTGGTCGTGGTCGTCATCTTCTCCTGTTCGCGTTGCTGGTCTTCGCTGGACGTTAGTCTTCCTTCCCCTTTTCTCCATCAGGTTCAGAGGCAATTTAATTTCTAATAAGGATTTTGATACGAGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGTTCCAACTTGCTGCTAGGATTATTATTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGTTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCTGACCATTGCCTTCTGTGACACCGATTCTCCGATGCACTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGATTGTCTGTTTTGGTTATTAGCAAGGATGGCTCTACATATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGAAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGAGAATGGGGGGCTGTTACAGCTAAACAATCCTGGACTGAACTAGTTCCTCAGCAACCCATTCCAGCTGCTCCTGTTAACTGCGCCTCAGACGCCGGTGATTGGGAGCCAGTTCTAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCCCTGGCTGGGACTAG | 1128 | 0.4982 | MTKISGGTGTRRDLSIREQIWGDRQRVRTKLRPETLISTPPQTLSPSCLLPADRRPSSPPSTLWSLSAASHPKLSNVVVFSWSWSSSSPVRVAGLRWTLVFLPLFSIRFRGNLISNKDFDTSIYIINLGKTWEKFQLAARIIIAIENPQDIIVQSARPYGQRVVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNILTIAFCDTDSPMHYVDVGIPANNKGKHSIDCLFWLLARMALHMRGTIRPGLKWDVMVDLFFYREPEEAKKQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAKQSWTELVPQQPIPAAPVNCASDAGDWEPVLAPQASVPAPGGVAPPGWD* | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy2g0875 | 375 | SUPERFAMILY | Ribosomal protein S2 | 121 | 277 | IPR023591 | - | |
Ahy2g0875 | 375 | TIGRFAM | uS2_euk_arch: ribosomal protein uS2 | 122 | 283 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Ahy2g0875 | 375 | Pfam | Ribosomal protein S2 | 190 | 257 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PRINTS | Ribosomal protein S2 signature | 122 | 131 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PRINTS | Ribosomal protein S2 signature | 213 | 224 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PRINTS | Ribosomal protein S2 signature | 196 | 213 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PRINTS | Ribosomal protein S2 signature | 234 | 248 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PRINTS | Ribosomal protein S2 signature | 171 | 188 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | Gene3D | - | 114 | 296 | - | - | |
Ahy2g0875 | 375 | MobiDBLite | consensus disorder prediction | 32 | 56 | - | - | |
Ahy2g0875 | 375 | Hamap | 40S ribosomal protein SA [rps-0]. | 85 | 324 | IPR027498 | GO:0003735|GO:0006412|GO:0015935 | |
Ahy2g0875 | 375 | PANTHER | 40S RIBOSOMAL PROTEIN SA | 122 | 367 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Ahy2g0875 | 375 | CDD | RPS2 | 123 | 260 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Ahy2g0875 | 375 | PANTHER | 40S RIBOSOMAL PROTEIN SA | 122 | 367 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy2g0875 | Ahy-Chr2 | 17234401 | 17238079 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy2g0875 | 117 | 367 | Cytoplasmic Ribosomal Protein Gene Family | AT3G04770 | 67.729 | 2.67e-115 | 335 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy2g0875 | K02998 | - | gmx:100818292 | 359.762 |