Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0865 ATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAACGCTACATCTTCAAACGCCGAAATGATGATATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGAATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTGAACAATACACTAGTGCGAATGCAATTGTTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACAAGCCTCGTCTACTCATTCTGATTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACTATTGCCTTCTGTGACACCGATTTTCCGATGTGCTATGTTGATATTGGCATTCCTGCCAATAACAAAAAGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAAGGGTACTATTTGTCTGGGGCTTAATTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGAGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCAGCTGCTCATGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGAAACCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGTTGGGACTAG 852 0.4695 MLAAEVHLGTKNCDFQMERYIFKRRNDDIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFEQYTSANAIVGRHTPGTFTNQMQTSYNKPRLLILIDPRTDHQPIKEGALGNIPTIAFCDTDFPMCYVDIGIPANNKKKHSIGCLFWLLARMVLQMKGTICLGLNWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWEAVTAEQSWTEPVPQQPIAAAHANWAPDAAAGDWKPVPAPQASVPAPGGVAPTGWD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0865 283 Hamap 40S ribosomal protein SA [rps-0]. 1 230 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0865 283 Gene3D - 1 202 - -
Ahy2g0865 283 PRINTS Ribosomal protein S2 signature 77 94 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 PRINTS Ribosomal protein S2 signature 28 37 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 PRINTS Ribosomal protein S2 signature 119 130 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 PRINTS Ribosomal protein S2 signature 140 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 PRINTS Ribosomal protein S2 signature 102 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 PANTHER 40S RIBOSOMAL PROTEIN SA 1 275 - -
Ahy2g0865 283 TIGRFAM uS2_euk_arch: ribosomal protein uS2 1 189 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0865 283 PANTHER 40S RIBOSOMAL PROTEIN SA 1 275 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0865 283 Pfam Ribosomal protein S2 1 97 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 ProSitePatterns Ribosomal protein S2 signature 2. 102 126 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 SUPERFAMILY Ribosomal protein S2 1 183 IPR023591 -
Ahy2g0865 283 CDD RPS2 1 167 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0865 283 MobiDBLite consensus disorder prediction 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0865 Ahy-Chr2 17072622 17074654 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0865 1 275 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 68.727 1.51e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0865 K02998 - gmx:100786575 412.92