Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0863 ATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTTGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACATTTTCAAGCACCGCAATGATGGTATCTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGTAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTTACTGATCCAAGGACTGATCATCAGCCCATTAAGAAAGGTGCTCTTGGAAATATTCCGACGATTGCCTTCTACGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCTTGCCAATAACAAGGGGAAGCACAATATTGGTTGTCTGTTTTGGTAA 552 0.4764 MATSAATTAAVSRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYIFKHRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANVIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKKGALGNIPTIAFYDTDSPMRYVDVGILANNKGKHNIGCLFW* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0863 183 CDD RPS2 25 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PANTHER 40S RIBOSOMAL PROTEIN SA 10 183 - -
Ahy2g0863 183 SUPERFAMILY Ribosomal protein S2 17 183 IPR023591 -
Ahy2g0863 183 Gene3D - 21 183 - -
Ahy2g0863 183 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 183 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0863 183 PANTHER 40S RIBOSOMAL PROTEIN SA 10 183 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0863 183 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0863 183 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0863 Ahy-Chr2 17058529 17059832 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0863 1 183 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 83.607 1.75e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0863 K02998 - twl:119983185 332.028