Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0847 ATGGCCACTTCCGCCGCCACCGCCACAACTGACGCAGTGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAATGCTACGTCTTCAAACGCCGAAATGATGAGCTTATGAAAGCATTTTTATGTTTGGTTGATTTTTCGTATTCCTTGTTCCCAATTATTTACATAATTAACCTTGGTAAGACATGGGAGAAGCTCCAACTTGTTGCTAGGATTATTGTTGCTATCGAGAACCTGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAATTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAAAGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAATATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTACAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGATGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAAAATATGCCATTCAAGATTTTGGTGCTGCTGCTTCCCCGCAGCTGATGGGGAATGGGGGCTGTTACAGCTAA 819 0.4615 MATSAATATTDAVPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMECYVFKRRNDELMKAFLCLVDFSYSLFPIIYIINLGKTWEKLQLVARIIVAIENLQDIIVQSARPYGQRIVLKFAQYTGANAIAGRHTPGTFTNQKQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHNIGCLFWLLARMVLQMRGTIRPGLKWDVMMDLFFYREPEEAKQQEEEELPAAPKYAIQDFGAAASPQLMGNGGCYS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0847 272 PANTHER 40S RIBOSOMAL PROTEIN SA 16 250 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0847 272 TIGRFAM uS2_euk_arch: ribosomal protein uS2 73 233 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0847 272 SUPERFAMILY Ribosomal protein S2 19 227 IPR023591 -
Ahy2g0847 272 CDD RPS2 27 211 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 Gene3D - 23 246 - -
Ahy2g0847 272 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 PRINTS Ribosomal protein S2 signature 184 198 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 PRINTS Ribosomal protein S2 signature 163 174 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 PRINTS Ribosomal protein S2 signature 146 163 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 PANTHER 40S RIBOSOMAL PROTEIN SA 16 250 - -
Ahy2g0847 272 Hamap 40S ribosomal protein SA [rps-0]. 11 259 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0847 272 Pfam Ribosomal protein S2 144 209 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 Pfam Ribosomal protein S2 27 142 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 ProSitePatterns Ribosomal protein S2 signature 2. 146 170 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0847 272 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0847 Ahy-Chr2 16474405 16476669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0847 1 269 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 71.004 1.63e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0847 K02998 - gmx:100786575 400.593