Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0841 ATGGCCACTTCCGCCGCCACCGCCACAACTGACGCAGTGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAATGCTACGTCTTCAAATGCCGAAATGATGTTATTTACATAATTAACCTTGGTAAGACATGGGAGAAGCTCCAACTTGTTGCTAGGATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAATTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAAAGCAAACATCCTATAACGAGTCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGATACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGATGTGATGATGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTACCCCAAAATATGCCATTCAAGATTTTGGTGCTGCTGCTTCCCCGCAGCTGATGGGGAACGGGGGCTGTTACAGCTGA 765 0.4719 MATSAATATTDAVPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMECYVFKCRNDVIYIINLGKTWEKLQLVARIIVAIENPQDIIVQSARPYGQRIVLKFAQYTGANAIAGRHTPGTFTNQKQTSYNESRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMMDLFFYREPEEAKQQEEEELPATPKYAIQDFGAAASPQLMGNGGCYS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0841 254 Hamap 40S ribosomal protein SA [rps-0]. 11 241 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 Gene3D - 23 228 - -
Ahy2g0841 254 Pfam Ribosomal protein S2 129 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 Pfam Ribosomal protein S2 27 126 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 CDD RPS2 27 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0841 254 PANTHER 40S RIBOSOMAL PROTEIN SA 16 231 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0841 254 SUPERFAMILY Ribosomal protein S2 19 209 IPR023591 -
Ahy2g0841 254 PANTHER 40S RIBOSOMAL PROTEIN SA 16 231 - -
Ahy2g0841 254 TIGRFAM uS2_euk_arch: ribosomal protein uS2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0841 Ahy-Chr2 16317532 16319764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0841 1 251 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 76.096 2.63e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0841 K02998 - gmx:548014 409.453