Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0840 ATGGCCACTTCCGCCACCACAACCGCTGAAGTGTCGCACCAGCTCTCGCGGAAGGAGCAAGACATCCAAATGATGCTCGTAGCTGAGGTTCATCTCGAAGGCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCTGCAATGATTGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAATGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTATTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCAATAGAGAATCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATTGCCAGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAATCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTTGGCCCCAGACGCCGCTGCAGGTGATTGGAAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCATCCATAGGTGTTGCTCCCACTGGCTGGGAATAA 924 0.4913 MATSATTTAEVSHQLSRKEQDIQMMLVAEVHLEGKNCDFQMERYVFKRCNDCIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPMTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGIIRPGLKWDVMVDLFFNRESEEAKQQEEEELPAAPVYAIQDFGATGIASFPAADGEWGAVTAEQSWTESVPQQPIAAAPANLAPDAAAGDWKPVPAPQASVPASIGVAPTGWE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0840 307 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0840 307 PANTHER 40S RIBOSOMAL PROTEIN SA 14 297 - -
Ahy2g0840 307 Gene3D - 21 226 - -
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 MobiDBLite consensus disorder prediction 280 307 - -
Ahy2g0840 307 SUPERFAMILY Ribosomal protein S2 18 207 IPR023591 -
Ahy2g0840 307 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 Pfam Ribosomal protein S2 120 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0840 307 Hamap 40S ribosomal protein SA [rps-0]. 9 263 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0840 307 PANTHER 40S RIBOSOMAL PROTEIN SA 14 297 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0840 Ahy-Chr2 16306796 16309102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0840 4 307 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 67.763 2.11e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0840 K02998 - gmx:100818292 450.669