Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0839 ATGGCCACTTCTGCCGCCACAACGGCTGCAGTGTCGCACCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCGTAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATAGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCAAACTTACTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAGTTGCTAGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCTTACTCATTCTGACTGATCCAAGGACTGATCATCACCGCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTATTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCAATAGAGAATCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATTGTGGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAATCAGTTCCTCAACAACCCATTGTAGCTGCACCTGCTAACTAG 828 0.4783 MATSAATTAAVSHQLSQKEQDIQMMLAAEVHLVTKNCDFQMERYVFKRRNDSIYIINLGKTWENLKLTARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAVARRHTPGTFTNQMQTSYNEPRLLILTDPRTDHHRIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGIIRPGLKWDVMVDLFFNRESEEAKQQEEEELPAAPVYAIQDFGATGIVGFPAADGEWGAVTAEQSWTESVPQQPIVAAPAN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0839 275 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 PANTHER 40S RIBOSOMAL PROTEIN SA 10 274 - -
Ahy2g0839 275 Hamap 40S ribosomal protein SA [rps-0]. 9 263 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0839 275 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0839 275 PANTHER 40S RIBOSOMAL PROTEIN SA 10 274 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0839 275 Pfam Ribosomal protein S2 120 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0839 275 Gene3D - 21 226 - -
Ahy2g0839 275 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0839 Ahy-Chr2 16303317 16305228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0839 1 274 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.168 3.46e-138 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0839 K02998 - gmx:100818292 442.965