Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0838 ATGGCCACTTTCGCCGCCACAACCGCTGCAGTGTCGCACCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAATGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACTGTATTGGTTGTCTGTTTTTGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTAAACTAA 624 0.4776 MATFAATTAAVSHQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPMTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHCIGCLFLLLARMVLQMRGTIRPGLKWDVMVN* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0838 207 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 PANTHER 40S RIBOSOMAL PROTEIN SA 10 206 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0838 207 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 206 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0838 207 Hamap 40S ribosomal protein SA [rps-0]. 9 205 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0838 207 Gene3D - 21 207 - -
Ahy2g0838 207 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0838 207 SUPERFAMILY Ribosomal protein S2 17 206 IPR023591 -
Ahy2g0838 207 PANTHER 40S RIBOSOMAL PROTEIN SA 10 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0838 Ahy-Chr2 16298516 16299795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0838 5 207 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 85.222 1.01e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0838 K02998 - gmx:100818292 376.326