Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0836 ATGGCCATTTCCGCCGCCACAACCGCTGAAGTGTCGCACCAGCTCTCGCGGAAGGAGCAAGACATCCAAATGATGCTCGTAGCTGAGGTTCATCTCGAAGGCAAAAACTGTGACTTCCAGATGGAACGCTACGTTTTCAAGCGCTGCAATGATTGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGTCTCGCCTACTTATTCTGACTGATCCAATGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGAGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCATCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCAATAGAGAATCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATTGTCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTTGGCCCCAGACGCCGCTGCAGGTGATTGGAAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCATCCATAGGTAATATCTCAAACAAGGCAAAACAGAAGGATTTGTCGGAGAAAATATCGGCGGCAAGGAATGAGAAAGGAGCAGAGGGGAACCCACATGTATCAGGGTTTAAGTTGACTAGGCTACCTTAA 1020 0.4804 MAISAATTAEVSHQLSRKEQDIQMMLVAEVHLEGKNCDFQMERYVFKRCNDCIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNESRLLILTDPMTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKEKHSIGCLFWLLARMVLQMRGTIHPGLKWDVMVDLFFNRESEEAKQQEEEELPAAPVYAIQDFGATGIVGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANLAPDAAAGDWKPVPAPQASVPASIGNISNKAKQKDLSEKISAARNEKGAEGNPHVSGFKLTRLP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0836 339 SUPERFAMILY Ribosomal protein S2 18 207 IPR023591 -
Ahy2g0836 339 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0836 339 PANTHER 40S RIBOSOMAL PROTEIN SA 14 297 - -
Ahy2g0836 339 Pfam Ribosomal protein S2 28 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 Pfam Ribosomal protein S2 125 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 Gene3D - 21 226 - -
Ahy2g0836 339 PANTHER 40S RIBOSOMAL PROTEIN SA 14 297 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0836 339 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 Hamap 40S ribosomal protein SA [rps-0]. 9 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0836 339 MobiDBLite consensus disorder prediction 287 339 - -
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0836 339 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0836 Ahy-Chr2 16238994 16246316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0836 3 293 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 68.729 4.98e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0836 K02998 - gmx:100818292 436.032