Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0835 ATGGCCACTTCCGCCGCCACCGCCACAACTGACGCAGTGCCATGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAATGCTACGTCTTCAAACGCCGAAATGATGTTATTTACATAATTAACCTTGGTAAGACATGGGAGAAGCTCCAACTTGTTGCTAGGATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAATTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAAAGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTAAACTAA 630 0.4698 MATSAATATTDAVPCQLSQKEQDIQMMLAAEVHLGTKNCDFQMECYVFKRRNDVIYIINLGKTWEKLQLVARIIVAIENPQDIIVQSARPYGQRIVLKFAQYTGANAIAGRHTPGTFTNQKQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0835 209 PANTHER 40S RIBOSOMAL PROTEIN SA 14 208 - -
Ahy2g0835 209 Hamap 40S ribosomal protein SA [rps-0]. 11 207 IPR027498 GO:0003735|GO:0006412|GO:0015935
Ahy2g0835 209 Gene3D - 23 209 - -
Ahy2g0835 209 TIGRFAM uS2_euk_arch: ribosomal protein uS2 20 208 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0835 209 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 CDD RPS2 27 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 PANTHER 40S RIBOSOMAL PROTEIN SA 14 208 IPR005707 GO:0003735|GO:0006412|GO:0015935
Ahy2g0835 209 SUPERFAMILY Ribosomal protein S2 19 208 IPR023591 -
Ahy2g0835 209 Pfam Ribosomal protein S2 27 124 IPR001865 GO:0003735|GO:0005840|GO:0006412
Ahy2g0835 209 Pfam Ribosomal protein S2 126 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0835 Ahy-Chr2 16201240 16202574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0835 1 209 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 83.254 8.31e-131 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0835 K02998 - twl:119983185 377.096