Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0831 ATGATGAAAGTTGGGTTTGAGGTTGTTCATGGAAATTCAAACATGATCATCAACCGTTCCTCTATGCATGAAACTTGGGACTATTCAAATCTTGTTTCTTTGCCACCTCCAATCCCATCAATCCAATTTCCAATAAAGCCCTCACCAAATGAAAACCAACAAAATGAAACATGTGATTGGGTTGACAACATTGCCAAGCACCTTAGTGTCAATGTTGATGAAGACTTACCACAACAAACAGCTAATGATGATAATCATAATAATAGCTTCACCAATAACTTTGGTCTTCATCAAATTCAATCAAACACCTCAAATTTAGACCATAATATTATTATTAACCACAATAGTAGTAGTAGTAATAATAATAACAATAATATCCATGATCAAGGTTTGAATTTGATTACCCTTCTAATGGAATGTGCTGTGGCAATCTCTGTGGACAACCTTGTTGATGCTCAAAGGATGTTGTTGGAGCTAACACAATTGGCGTCACCTTACAAGGCATCATGTGCTGAAAGAGTTGTTGCATATTTTGCAAAAGCCATGAATAGTAGGGTCATGAATTCTTTTCTTGGTGTGTGTTCACCTTTGATTATTGATCACAAGAGCATTCATTCATCATTCCATGTTTTCAACAATGTTTCCCCTTTCATCAAATTTGCACATTTCACTTCCAACCAAGCAATTCTTGAGGCAGTGAATAGGTGCCAATGCATACACATCATTGATTTGGACATCATGCAAGGCCTTCAATGGCCAGCATTCTTCCACATTCTTGCCACAAGATTTGAGGGTCCACCCGAGGTCACAATGACCGGTATCGGCGCATCCATGGACCTCCTTGTCGAGACGGGGAAACAGCTCTCGAATTTCGCCAGACGGCTTGGAATGCCATTGAAATTCCACCCTGTCGTGGCGAAATTTGGGGAAATTGACGCATCTATGGTGCAAATTAGGTCTTGTGAGACGGTGGCGGTTCATTGGTTGCAACATTCAATGTACGATTCAACCGGGCCGGACTGGATGACCTTGAGACTAATAAAGGAATTGGAGCCAAGAATCATCACATTAGTAGAACAAGATGTAAACAATGGAGGATCATTCTTGGATAGGTTTGTTGGATCATTGCACTACTACTCAACAATATTTGATTCCCTTGGTGCATACTTGGAAATTGATGATCCTAATAGGCACAATGTTGAGCATGGAGTGTTGTCTAGGGAGATCAACAACATATTGGGCATAGGTGGACCATCAAGGAGTGGTGAGGAAAAGTTTATTAGGCAATGGAGGAATGAACTCATTTCAAGGAACAATTGGTTTGTGCAAGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATACTTAATATGTTCTCACCACCACATGGTTATAGCCTTGCTCATGTTGATGGCACTTTGAGGCTTGGTTGGAAGGATACTAGCTTGTACACTGCTTCTGCATGGACTTGTAATGCTTTTAGCTAG 1494 0.4036 MMKVGFEVVHGNSNMIINRSSMHETWDYSNLVSLPPPIPSIQFPIKPSPNENQQNETCDWVDNIAKHLSVNVDEDLPQQTANDDNHNNSFTNNFGLHQIQSNTSNLDHNIIINHNSSSSNNNNNNIHDQGLNLITLLMECAVAISVDNLVDAQRMLLELTQLASPYKASCAERVVAYFAKAMNSRVMNSFLGVCSPLIIDHKSIHSSFHVFNNVSPFIKFAHFTSNQAILEAVNRCQCIHIIDLDIMQGLQWPAFFHILATRFEGPPEVTMTGIGASMDLLVETGKQLSNFARRLGMPLKFHPVVAKFGEIDASMVQIRSCETVAVHWLQHSMYDSTGPDWMTLRLIKELEPRIITLVEQDVNNGGSFLDRFVGSLHYYSTIFDSLGAYLEIDDPNRHNVEHGVLSREINNILGIGGPSRSGEEKFIRQWRNELISRNNWFVQVPMSANSMAQAQLILNMFSPPHGYSLAHVDGTLRLGWKDTSLYTASAWTCNAFS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0831 497 ProSiteProfiles GRAS family profile. 124 492 IPR005202 -
Ahy2g0831 497 PANTHER OS05G0485400 PROTEIN 25 493 - -
Ahy2g0831 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 493 IPR005202 -
Ahy2g0831 497 Pfam GRAS domain family 133 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0831 Ahy-Chr2 16017952 16019577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0831 128 492 GRAS Transcription Factor Family AT3G54220 52.022 3.09e-127 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy2g0831 GRAS 4.40E-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0831 - - gmx:100775656 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0956 12 20129917 20131891 Ahy2g0831 2 16017952 16019577 hybridization