Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0788 ATGGGTAGAGCTCCATGCTGTGAGAAACTAGGGTTGAAGAAGGGGCCTTGGACCCCAGAAGAAGATCAAATCCTCATCAATTATATCAACACAAATGGTCACAATAATTGGCGTGCCCTTCCCAAACAAGCTGGGTTATTGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATTTGAGGCCAGATATCAAACGGGGCAACTTTACCAATGAAGAAGAAGAGACAATACTCAAGTTACATGAAATGTTGGGAAACAGATGGTCAGCAATTGCAGCAAGATTGCCGGGTCGCACAGATAACGAGATTAAAAATGTTTGGCACACCCACTTGAAGAAAAGGTTGCCCCCACAAGAAAACAACAACATTAAGAGCACAAAGAAGCCACGTCCAAAACAAAAGAAGAAGTTGGAAATTACAAAAAAGTCCAACAAAACCTCATCAAAACAAAAACAAGAAAAAGAAGAAGAGGAACCCATCATCAAAATTGAGGGAAGGACAATGATGTCTCCTAATACACAGTGTTCAAGCAGTAGTAATAATAATAATAATAATGATGGTGTGTCAATGAACAATTCAAGTGGTGGTGAATCGATTAATAATGATGGTGATGGTAATAAGGATGATAATTTGGCATTGGACGAGGAGTTTTGGTCTGAAGTTTTGTCATCGGATAATTCGTATGATGAGGATGCAAGAAAATTTGAGGACATTGAATTTGGTGACTTAGATTTGTTCCACTTTCCGTTGTTATCTTCATCAGCATCAACTGTTGCATGTGATGGCATGGATTCTTGGTATGATTTTTGCACAAAATCTTTGGAATTGCCACAATTGTGA 843 0.3855 MGRAPCCEKLGLKKGPWTPEEDQILINYINTNGHNNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEETILKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPPQENNNIKSTKKPRPKQKKKLEITKKSNKTSSKQKQEKEEEEPIIKIEGRTMMSPNTQCSSSSNNNNNNDGVSMNNSSGGESINNDGDGNKDDNLALDEEFWSEVLSSDNSYDEDARKFEDIEFGDLDLFHFPLLSSSASTVACDGMDSWYDFCTKSLELPQL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0788 280 CDD SANT 69 112 IPR001005 -
Ahy2g0788 280 SMART sant 66 114 IPR001005 -
Ahy2g0788 280 SMART sant 13 63 IPR001005 -
Ahy2g0788 280 MobiDBLite consensus disorder prediction 110 211 - -
Ahy2g0788 280 CDD SANT 16 61 IPR001005 -
Ahy2g0788 280 Gene3D - 69 116 - -
Ahy2g0788 280 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy2g0788 280 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy2g0788 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 273 - -
Ahy2g0788 280 Gene3D - 11 67 - -
Ahy2g0788 280 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy2g0788 280 PANTHER TRANSCRIPTION FACTOR MYB15 1 273 - -
Ahy2g0788 280 MobiDBLite consensus disorder prediction 168 202 - -
Ahy2g0788 280 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy2g0788 280 MobiDBLite consensus disorder prediction 141 164 - -
Ahy2g0788 280 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy2g0788 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy2g0788 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0788 Ahy-Chr2 14457751 14461771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0788 1 280 MYB Transcription Factor Family AT2G31180 47.857 1.54e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy2g0788 Myb_DNA-binding 1.60E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0788 K09422 - gmx:100775603 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0922 12 18625114 18629730 Ahy2g0788 2 14457751 14461771 hybridization