Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0783 ATGGAGGGAGGAAAATCATCATCATCGTCGTCGTCATCAATTTCTAATGGCAATAATGTTGAAGTAAGGTATAGAGGGATTCGTAGGAGGCCATGGGGAAAATTTGCGGCGGAAATTCGTGACCCGACAAGAAAAGGGACAAGAATATGGCTTGGAACATTTGAAACTGCTGAAGAAGCTGCAAGGGCTTATGATGCTGCTGCTTTTCATTTCCGTGGCCATAGGGCCATTCTCAATTTCCCAAATGAGTATCAAGCTCCTCTTAACCCTAATTCGTCCTTGCCTTTGCCTCTTCCTGTTCATCCTCCTCCTCCTGCTCCTCATTCGAACACAAATGCATATAATTTGGGTTCGTATTCGAATGAGGGGATAGTGCAGGGTGATCATAGTCATGATCGTGCTTTCGAATTGGAGTATTTGGACAATAAGTTGTTGGAAGAACTACTCCAACAAGCTCAAGATGATGATAGGTATATATACCAGTGCAATGATCATCATACATTTTACAGATAA 513 0.425 MEGGKSSSSSSSSISNGNNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNEYQAPLNPNSSLPLPLPVHPPPPAPHSNTNAYNLGSYSNEGIVQGDHSHDRAFELEYLDNKLLEELLQQAQDDDRYIYQCNDHHTFYR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0783 170 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Ahy2g0783 170 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Ahy2g0783 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 148 - -
Ahy2g0783 170 PANTHER DNA-BINDING DOMAIN 23 148 IPR044808 GO:0003700|GO:0009873
Ahy2g0783 170 Gene3D AP2/ERF domain 22 83 IPR036955 GO:0003700|GO:0006355
Ahy2g0783 170 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Ahy2g0783 170 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Ahy2g0783 170 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
Ahy2g0783 170 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Ahy2g0783 170 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0783 Ahy-Chr2 14287336 14288181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0783 18 149 AP2-EREBP Transcription Factor Family AT3G23230 50.758 1.58e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy2g0783 AP2 2.30E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0783 - - aip:107628225 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0915 12 18377675 18378587 Ahy2g0783 2 14287336 14288181 hybridization
Ahy16g0127 16 1264146 1264899 Ahy2g0783 2 14287336 14288181 PCT
Ahy6g1206 6 17765902 17766630 Ahy2g0783 2 14287336 14288181 PCT
Ahy2g0783 2 14287336 14288181 Ahy16g0127 16 1264146 1264899 PCT
Ahy2g0783 2 14287336 14288181 Ahy6g1206 6 17765902 17766630 PCT