LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g0768	ATGTCTGCGAATTTCTGGACTTCATCTCACTACAAGCATCTTCTGGACCAAGAAGATGTGGATATGGTGAACCCACTTGACAAAGAAAGGGGAGTCACACTTGAGGATTTCAAGCTCATAAAGATGCACATGACCAATTATATTTTGAGATTGGCCCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCAGTTACATATATGAGGCGTGTTTACACCCGGAAGAGTATGGCTGAGTATGATCCACGTCTGGTTGCTCCAACCTGCTTGTACCTAGCATCAAAAGCAGAGGAAAGCACAGTGCAGGCTCGGCTGCTTGTATTTTACATTAAAAAATTGTATGCTGATGATAAGTACAGGTATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTTGTATTCCACCCCTATCGTTCACTGTCGCAGTTTCTTCAAGATGCAAGTTTGAATGACCTAAGCATGACTCAGCTAACTTGGGGCGTCATAAATGACACATACAAGATGGATCTAATTCTTGTTCATCCTCCGCATCTTATTGCTTTAGCTTGCATCTACATTGCTAGCGTATTCCGGGAGAAAGACACGACTGCTTGGTTTGAAGAACTACGTGTTGACATGAATGTGGTAAAAAATATATCGATGGAGATACTTGATTTTTATGAAAGCAACAGGATGTTCACGGAAGATAGAATTAATACTGCTCTCCAGAAGCTAACCTTGAGGCCCTAA	762	0.4121	MSANFWTSSHYKHLLDQEDVDMVNPLDKERGVTLEDFKLIKMHMTNYILRLAQQVKVRQRVVATAVTYMRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYADDKYRYEIKDILEMEMKILEALDYYLVVFHPYRSLSQFLQDASLNDLSMTQLTWGVINDTYKMDLILVHPPHLIALACIYIASVFREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTEDRINTALQKLTLRP*	254

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy2g0768	253	Gene3D	-	19	143	-	-
	Ahy2g0768	253	SMART	cyclin_7	149	229	IPR013763	-
	Ahy2g0768	253	SMART	cyclin_7	46	136	IPR013763	-
	Ahy2g0768	253	CDD	CYCLIN	46	135	IPR013763	-
	Ahy2g0768	253	Pfam	Cyclin, N-terminal domain	43	142	IPR006671	-
	Ahy2g0768	253	PIRSF	Cyclin_C_H_G	1	253	-	-
	Ahy2g0768	253	Gene3D	-	7	240	-	-
	Ahy2g0768	253	PANTHER	CYCLIN	4	248	IPR043198	GO:0006357\|GO:0016538
	Ahy2g0768	253	SUPERFAMILY	Cyclin-like	146	244	IPR036915	-
	Ahy2g0768	253	CDD	CYCLIN	146	213	IPR013763	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g0768	Ahy-Chr2	13931793	13939199	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy2g0768	60	199	Core Cell Cycle Gene Families	AT5G27620	30.000	4.79e-12	62.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g0768	K15161		-	gmx:100784345	463.766

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