Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0765 ATGACTTCCCCTAATTTCTTTGAGATCCAAGACTGGAACACATCATCTTCACCAAATTTTTGCTTCCAAACATTTTCCAACAACAATGTTGATGATTCTCCTTCTTTTGATATCATCGACTTCTCTATGCATTCACAACAAGTCCCAAAAATAGGTAACAACAACAAATACAAGGAGAAAAATGTGAAGAACAAGAAGCATGAAGAAGAAGATGAAGAGGTTCATCATGGTGAAAAAGGAAGGTACATAGGTGTAAGAAAAAGGCCATGGGGGAAATTCGCAGCCGAAATTCGAGACACAACAAGAAATGGAACAAGGGTTTGGCTTGGAACCTTTGATTGTGCTGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTTGCCATGAGAGGTTACAATACTGTTCTCAATTTTCCAGTCCAAAAGGTCAAAGATTCCTTGCAAGGAATTGAGTATAGTTGTGGCAACAACAACAACAAAGGGTATTCACCAGCACTTGCACTCAAAGAGAGAAACTACATGAGAAGAAAATTGTCATCATCAAAGGAAAATGATACTACTCAAAATGCAAAGTGTAAAGGGAAAAGTGAAGAATCATCATCATCATCATCATCATCATCATCATCAAGTAGTAGTGTGATGGTGTTAGAGGACTTAGGAGTTGAATATCTTGAGCAACTCCTAAGTATTTCGGATAATAATAATAATAATCATCAAGGTGGAAGTCCTAGCTATTACTTCAATTAA 747 0.3708 MTSPNFFEIQDWNTSSSPNFCFQTFSNNNVDDSPSFDIIDFSMHSQQVPKIGNNNKYKEKNVKNKKHEEEDEEVHHGEKGRYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFDCAEDAALAYDQAAFAMRGYNTVLNFPVQKVKDSLQGIEYSCGNNNNKGYSPALALKERNYMRRKLSSSKENDTTQNAKCKGKSEESSSSSSSSSSSSSSVMVLEDLGVEYLEQLLSISDNNNNNHQGGSPSYYFN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0765 248 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 PANTHER DNA-BINDING DOMAIN 56 230 IPR044808 GO:0003700|GO:0009873
Ahy2g0765 248 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 MobiDBLite consensus disorder prediction 177 211 - -
Ahy2g0765 248 Gene3D AP2/ERF domain 80 141 IPR036955 GO:0003700|GO:0006355
Ahy2g0765 248 MobiDBLite consensus disorder prediction 193 211 - -
Ahy2g0765 248 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Ahy2g0765 248 PANTHER AP2 DOMAIN CONTAINING PROTEIN, EXPRESSED 56 230 - -
Ahy2g0765 248 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Ahy2g0765 248 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0765 Ahy-Chr2 13757297 13758244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0765 82 236 AP2-EREBP Transcription Factor Family AT3G23240 48.387 9.14e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy2g0765 AP2 3.20E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0765 K14516 - gmx:100812017 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0908 12 18138829 18146752 Ahy2g0765 2 13757297 13758244 hybridization
Ahy16g1132 16 20493050 20493897 Ahy2g0765 2 13757297 13758244 PCT
Ahy6g0270 6 3355096 3356039 Ahy2g0765 2 13757297 13758244 PCT