Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0762 ATGGCAGATTCTGATGAAGTGGCAAAATCTGCTGAAAACCAGCAAACAGAGCAAGTGTGCAGCTTCTTCAGGAAACCAATTAATAAGAAGAATATAAGGAAACGTGCTATTGATAGTGAAGATGAGGGTGATGATTCAAAAAATGAAAACTCTTTGTTGCATGCTCAGAAGAAGGCTCCGAAGCCTGACAATAAGTTGTACTTTTCAACTGGCCCCTCGAAAAGCTGTGTGTCTACTGACCCAAGTGAAGAATCTGAAAAAACCGGTTTTCATTTCGAGTCTTCGAAAGAGATTCAAGTTCAACATGATAGCAAAGCAACAGCAACTCTAGAGACAGAGACCGACTTTTCCAGAGATGCTCGTGCGATCCGTGAACGAGCTCTTAAGCAAGCAGAAGAGAGTTTGAAGGGGAAAGGCACAAGTTCTGAGGATGGCAAACTATATAAGGGAATGAACAGTTACAAAGATTACAAGGCCGGCTTCCGGAGAGAGCAAACAATTGCTAGCGAAAAGGCTGGTGGTTCACATGGTCCTCTCAGGGCTTCGGCTCATATAAGAGTTTCAGCGAGATTCGATTATCAGCCTGATATATGTAAGGATTACAAGGAGACTGGTTACTGTGGGTATGGTGATTCCTGTAAGTTTATGCATGATCGAGGGGATTACAAGTCTGGATGGCAGTTGGAGAAGGAATGGGATGAAGCTGAGAAGGCAAGGAGGATGAGATTGGCTGCAGGTGAAGATGCGGACGAGGAAAGTGCTGATTTAGCTGATAGTGACGATGAAGATGCATTGCCATTTGCATGTTTTATTTGTAGGAAGCCTTTTGCGGATCCTGTTGTAACCAAGTGCAGGCACTACTTCTGTGAGCATTGCGCCTTAAAGCATCATGCAAAGAACAAGAAGTGTTTTGTGTGCAACCAACCAACTCTCGGCATTTTCAATGTTGCCCATGAGATACGAAAGAAGATGGCTGAGGATAAAGATAAATGA 993 0.4361 MADSDEVAKSAENQQTEQVCSFFRKPINKKNIRKRAIDSEDEGDDSKNENSLLHAQKKAPKPDNKLYFSTGPSKSCVSTDPSEESEKTGFHFESSKEIQVQHDSKATATLETETDFSRDARAIRERALKQAEESLKGKGTSSEDGKLYKGMNSYKDYKAGFRREQTIASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKARRMRLAAGEDADEESADLADSDDEDALPFACFICRKPFADPVVTKCRHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRKKMAEDKDK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0762 330 MobiDBLite consensus disorder prediction 31 118 - -
Ahy2g0762 330 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE 9 328 - -
Ahy2g0762 330 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 193 218 IPR000571 GO:0046872
Ahy2g0762 330 SUPERFAMILY CCCH zinc finger 191 223 IPR036855 GO:0046872
Ahy2g0762 330 SMART ring_2 269 306 IPR001841 -
Ahy2g0762 330 SMART c3hfinal6 192 219 IPR000571 GO:0046872
Ahy2g0762 330 CDD RING-HC_RNF113A_B 267 307 - -
Ahy2g0762 330 SUPERFAMILY RING/U-box 268 311 - -
Ahy2g0762 330 MobiDBLite consensus disorder prediction 32 61 - -
Ahy2g0762 330 PANTHER ZINC FINGER PROTEIN 183 9 328 IPR039971 -
Ahy2g0762 330 ProSiteProfiles Zinc finger RING-type profile. 269 307 IPR001841 -
Ahy2g0762 330 ProSiteProfiles Zinc finger C3H1-type profile. 192 220 IPR000571 GO:0046872
Ahy2g0762 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 326 IPR013083 -
Ahy2g0762 330 ProSitePatterns Zinc finger RING-type signature. 284 293 IPR017907 -
Ahy2g0762 330 Gene3D - 190 224 - -
Ahy2g0762 330 MobiDBLite consensus disorder prediction 80 100 - -
Ahy2g0762 330 Pfam Zinc finger, C3HC4 type (RING finger) 268 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0762 Ahy-Chr2 13591989 13596779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0762 10 330 C2H2 Transcription Factor Family AT1G01350 70.717 1.95e-170 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy2g0762 zf-C3HC4_3 4.60E-09 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0762 K13127 - gmx:100787434 555.829