Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0745 ATGAGATCTTCGTTAGAGGCTTCACCATCTTCATCATGCAGATCGAAGAAACACAAGGATCTGAGCTCAAAACTCGTTTCTTCAGATTCGGTTTCGCTCAATACCAAGACACCGGAGAAACCACCGGAGCTGACGCGCCACACGCGCCGCACGCGCAATCGGGGCGTAGCGCTCTCGTTGTCGGAGGTGCGGAGAGTTGCCAAGGGCCTCCAGGAGCAGCGCGGCCGTGAAACGACGTTGTTTGGCGACAAATCTGCGAGGAGGCAGATCGAGCTGCGTTCGCCGAGCAAACCCCAAAAAACCAGTTCCGATGAAGAAGAAGCCTTCAAGCTTCCCGAAAAGTATGAGATTTTGGGCGAGTATTTTGCTAGGTTGGATTGTTCGATTCGACTGCTGCGCATGAAAGGAATGACACCGTCTTTCTCCAAAATCAGCCACAAGATTGAAAGTTTAACTGATAGGAGGTTTACACTTAGTCATTTGGCTCAGTTGAAATTCGTGTTGCCTGAGGCAATTGTGGCTAAGAAGGTGTTAGTGTTTGATGAGAAGACAAGTTGTATGAAGCCAGATCTGCATGTCACTATTAACTATGATGCGGTGGAGTTTGCATCAAAGTTGCCAACCGAAGGCGGCCGGGGCATGCTGTTGAGGAAGTTGTTCCGTGCGCGGCTGAGAGATTTTGTTGAATCCCATCCTGGGGGAGATGAAATTCCGGAAGAAGCGCTACCCGAACCATTCAACCCAAAGCAACATCGTCTATCAGACATATTGACAAGGCCTTTCTCATCTAAGGCGACAATATCGGATGCAGATGCAGCTCACCCTTCAACAGTATCATCGGCAGTCATTCCGGATAATGACACTGAAATAGACTTGTTAGAACCTGTTAGGACATCAATTGAATCCCTTAACCAGCAACCATCAGCAGCCTCTCATGTGCCTCAATCTTTCAGAAGACGGTTCTCTCAGAGGTTGAAGGAAAATGGAACAGATAATAATGCACTGGAAAAATTGCCATCAGATTCATTGCAAACTGTGGTTTTACCGGATTCAGAGTCAGGCCTGAGTGATAGACCTACCTCAGAAGGAGCCAGTAATGAAGTATGCCTCACAAATTGTTCTTCATCTGGTGCTCCACTTGCTACTCCATGCAAAACCATTGAACATACAGAAAATAATGGGTCTCAAAAATGCTTTGATGCTGTGTCAACCCCAGCCAAATGTATTTCTACTCCAGCCAGCATAACACCTGCATTGCCTACGCCTCCTAAGAGACAATTCATGAGTCCAGAGGATAACTCTTCCACTACTACTAACAAGTTGGTTAGGCGCCCACCTCCATCGCTAAGGTCGTTGAAATTCGAAACTCCGGTTAAAAATAAGGAGGCAGAGAAAGAGAAATTTGAAACTCCAGTTAAAAATAAGGAGGCAGAGGAAGAATATGATGATCTTTTGGATGTTCTCCCTGAGAGTCTTCTGCAATCGATTAGAGAAAAGGAAATACAAGCAATGGAGGAAAGAGATCCAGCTATTTCACAAGCAAAGAGACGGCGAAAAATGATCGCTGGCCTACCTAAGATCTTTAACATGATTCACCTCTTGCTCCAGTCAATGAACCGCTCCGTTATCACGAAAGAGGAGCTTGTGAGCAAGATAATCTCTGGCAATTGTGATATTGTTGATAGAAGCGAAGTAGAAGAACAATTGAATTTGTTGCTAGAACTAGCACCAGATTGGATTTCTGAGAAGTTGGCCTCTAGTGGAGATTTCCTTTTCTGCATAAATAAAATGGTGGACGCCGTGACCATACGCGCATCACTTCAAGAAGCAAAATGA 1836 0.4564 MRSSLEASPSSSCRSKKHKDLSSKLVSSDSVSLNTKTPEKPPELTRHTRRTRNRGVALSLSEVRRVAKGLQEQRGRETTLFGDKSARRQIELRSPSKPQKTSSDEEEAFKLPEKYEILGEYFARLDCSIRLLRMKGMTPSFSKISHKIESLTDRRFTLSHLAQLKFVLPEAIVAKKVLVFDEKTSCMKPDLHVTINYDAVEFASKLPTEGGRGMLLRKLFRARLRDFVESHPGGDEIPEEALPEPFNPKQHRLSDILTRPFSSKATISDADAAHPSTVSSAVIPDNDTEIDLLEPVRTSIESLNQQPSAASHVPQSFRRRFSQRLKENGTDNNALEKLPSDSLQTVVLPDSESGLSDRPTSEGASNEVCLTNCSSSGAPLATPCKTIEHTENNGSQKCFDAVSTPAKCISTPASITPALPTPPKRQFMSPEDNSSTTTNKLVRRPPPSLRSLKFETPVKNKEAEKEKFETPVKNKEAEEEYDDLLDVLPESLLQSIREKEIQAMEERDPAISQAKRRRKMIAGLPKIFNMIHLLLQSMNRSVITKEELVSKIISGNCDIVDRSEVEEQLNLLLELAPDWISEKLASSGDFLFCINKMVDAVTIRASLQEAK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0745 611 MobiDBLite consensus disorder prediction 67 107 - -
Ahy2g0745 611 Pfam DNA replication factor Cdt1 C-terminal domain 491 583 IPR032054 -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 25 39 - -
Ahy2g0745 611 Gene3D - 479 611 IPR038090 -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 267 284 - -
Ahy2g0745 611 CDD Cdt1_c 482 608 IPR032054 -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 1 107 - -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 427 444 - -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 413 451 - -
Ahy2g0745 611 MobiDBLite consensus disorder prediction 267 286 - -
Ahy2g0745 611 SUPERFAMILY "Winged helix" DNA-binding domain 100 246 IPR036390 -
Ahy2g0745 611 PANTHER DNA REPLICATION FACTOR CDT1 17 611 IPR045173 GO:0003677|GO:0030174|GO:0071163
Ahy2g0745 611 SMART CDT1_2 111 244 IPR014939 -
Ahy2g0745 611 Pfam DNA replication factor CDT1 like 111 175 IPR014939 -
Ahy2g0745 611 CDD Cdt1_m 95 247 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0745 Ahy-Chr2 13283055 13286396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0745 403 609 Core DNA Replication Machinery Family AT2G31270 48.571 4.28e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0745 K10727 - gmx:100778818 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0888 12 17611843 17615415 Ahy2g0745 2 13283055 13286396 hybridization