Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0726 ATGGAAGGGAAGAACTATTATATGAAGAACAAGAACACTAGTAGTAGTACTACTCATAATAACAATAGCTTTGAGGAGCATTATTCATGGGAAACTTCTTCATCAACACGGCCAACAAGAAGCTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAAATCTGCTCAAGCTTTGGGTGGACACATGAATGTTCATAGAAGGGACAGGGCAAGATTGAGATCTTCATGGATTTCTAATCACACTCCTAAACCTAATCTTAACCCCAACCCTAACCCTAATCCTACAACGACTCTTGTTTCTTCATCATCATCTCCTTTATCTAATGATCCTATCAATAATTGTTCACATATTTCTCCAATTTATAGCCCTAATTGTTGTCTCAATTTATCTTCTTCTTCTTCACCCTCCCCTAATTTAGCTTCCATCACAAGAAGTGAAGATAAAAAACCTAGACTCATCATATCTACTCCACAAGTTCTTCCTCTTGTGATGAATAGTCCTCAAAACATGGTGATGATGATGAGTAAGAAAAGCAAAAGTGGTGATTTTGTTGGTGGGGTTGATGATGATGAGAATTACAAGGATAATGTTTTCAAGCACAAGAATGAGCATAACAACATTACCTTGGAGTTGGGAATAGGATTGGTTAAGCACAAAGAGCAGAAGTTGGATTTGGAGCTTAGACTCTAG 687 0.3755 MEGKNYYMKNKNTSSSTTHNNNSFEEHYSWETSSSTRPTRSYACSFCKREFKSAQALGGHMNVHRRDRARLRSSWISNHTPKPNLNPNPNPNPTTTLVSSSSSPLSNDPINNCSHISPIYSPNCCLNLSSSSSPSPNLASITRSEDKKPRLIISTPQVLPLVMNSPQNMVMMMSKKSKSGDFVGGVDDDENYKDNVFKHKNEHNNITLELGIGLVKHKEQKLDLELRL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0726 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Ahy2g0726 228 Pfam C2H2-type zinc finger 42 66 - -
Ahy2g0726 228 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 7 228 - -
Ahy2g0726 228 SUPERFAMILY beta-beta-alpha zinc fingers 39 68 IPR036236 -
Ahy2g0726 228 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Ahy2g0726 228 PANTHER OS07G0101800 PROTEIN 7 228 - -
Ahy2g0726 228 MobiDBLite consensus disorder prediction 7 22 - -
Ahy2g0726 228 MobiDBLite consensus disorder prediction 1 22 - -
Ahy2g0726 228 Gene3D Classic Zinc Finger 9 84 - -
Ahy2g0726 228 MobiDBLite consensus disorder prediction 91 106 - -
Ahy2g0726 228 SMART c2h2final6 42 64 IPR013087 -
Ahy2g0726 228 MobiDBLite consensus disorder prediction 76 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0726 Ahy-Chr2 12577953 12578639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0726 5 228 C2H2 Transcription Factor Family AT3G23130 32.314 5.64e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g0726 zf-C2H2_6 6.60E-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0726 - - ahf:112721869 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0854 12 16501026 16502242 Ahy2g0726 2 12577953 12578639 hybridization
Ahy16g0136 16 1388758 1389375 Ahy2g0726 2 12577953 12578639 PCT
Ahy6g1195 6 17582813 17583875 Ahy2g0726 2 12577953 12578639 PCT
Ahy2g0726 2 12577953 12578639 Ahy16g0136 16 1388758 1389375 PCT
Ahy2g0726 2 12577953 12578639 Ahy6g1195 6 17582813 17583875 PCT