Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0697 ATGTCGTCGGAAGAGCCCACTGTTGTAGTAGCACCACCAGCTTCGGAGCCAGCACCCGAACCAACCACCAACACCGAGCCTCCTCAAGAAGACAAAACTGAACCCGAACCTGCTGCCGAAGCAACAGAAGAAGCCACTAAAGCTAAGAAAACCAAGGAGCCCAAACCTAAGAAGGCTTCCAAGCCTAGAAGCCCACCGACTCACCCTCCTTACCAAGAGATGATCAAGGACGCTATTGTTACGTTGAAGGAGAAAAACGGTTCGAGCCAATACGCGATTCAGAAGTTTCTCGAAGAAAAGCATAAGCAGTTTCCAACGAACTTCAGAAAGCTTCTTTTGTTCAATTTGAAGAAGCTCGTAGCTTCTGGAAAGCTCGTTAAGGTTAAAGGTTCCTTCAAGCTTCCGGCATCAAAGGCGCCAGCATCATCAGCGCCTTCGCAGGCAAAGAAGCCCGCGGCTACTAAGACCAAGACCAAGTCCAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCGCTGTCAAGGTGAAGGCAACAAAAGCAAAGACAACCAAGACTAAATCGGTGAAATCAGTTTCAGCTAAGTCTAAGCCCAAGCCCGCTCCAAAGCCCAAGGCTGTGGCGAAGCCTAAAGCAGCTGCAGCAGCGAAGCCCAAGGCTGCTGCAGCTAAGACCAAAGCAAAGCCCAAGGCAGCTGCTAAGCCACCGGCAAAAGTGTCGAGGATGTCGACTAGGGCTTCGCCAGGAAAGAAGGCTGCACCTGCCGCAAAGCCTGTAGCAAAGAAGGTTGCGGCAGCGAAGAAGAGCGTGAAGCCCAAGAGCGTAAGGTCTCCGGCGAAGAGGGCTTCGGTGAAGAGGGGCGGAAGGAAGTGA 867 0.5236 MSSEEPTVVVAPPASEPAPEPTTNTEPPQEDKTEPEPAAEATEEATKAKKTKEPKPKKASKPRSPPTHPPYQEMIKDAIVTLKEKNGSSQYAIQKFLEEKHKQFPTNFRKLLLFNLKKLVASGKLVKVKGSFKLPASKAPASSAPSQAKKPAATKTKTKSKPKPKPKPKPAVKVKATKAKTTKTKSVKSVSAKSKPKPAPKPKAVAKPKAAAAAKPKAAAAKTKAKPKAAAKPPAKVSRMSTRASPGKKAAPAAKPVAKKVAAAKKSVKPKSVRSPAKRASVKRGGRK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0697 288 CDD H15 65 144 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy2g0697 288 PANTHER HISTONE H1.1 21 285 - -
Ahy2g0697 288 Gene3D - 63 141 IPR036388 -
Ahy2g0697 288 SMART h15plus2 65 131 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy2g0697 288 MobiDBLite consensus disorder prediction 262 288 - -
Ahy2g0697 288 PRINTS Histone H5 signature 81 98 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Ahy2g0697 288 PRINTS Histone H5 signature 54 75 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Ahy2g0697 288 PRINTS Histone H5 signature 157 171 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Ahy2g0697 288 PRINTS Histone H5 signature 191 208 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Ahy2g0697 288 PRINTS Histone H5 signature 213 232 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Ahy2g0697 288 MobiDBLite consensus disorder prediction 1 77 - -
Ahy2g0697 288 SUPERFAMILY "Winged helix" DNA-binding domain 64 145 IPR036390 -
Ahy2g0697 288 MobiDBLite consensus disorder prediction 154 182 - -
Ahy2g0697 288 MobiDBLite consensus disorder prediction 27 51 - -
Ahy2g0697 288 Pfam linker histone H1 and H5 family 68 134 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy2g0697 288 MobiDBLite consensus disorder prediction 134 288 - -
Ahy2g0697 288 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 67 136 IPR005818 GO:0000786|GO:0003677|GO:0006334
Ahy2g0697 288 PANTHER HISTONE H1 21 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0697 Ahy-Chr2 11528564 11529823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0697 74 165 Single Myb Histone (SMH) Gene Family AT1G49950 38.043 1.08e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0697 K11275 - cpap:110814810 128.642