Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0680 ATGGAGAAGATGGTGTTTGAGGAAACTGAGCTCAGGCTTGGGCTGCCAGGGAACAACAAGAAGAAGAACAATGAAAAGAAGAGAGGGTTCTCTGAGACCGAATCTGAAACTGAGAGTGATGAGAACAATAACAGTGATGAAACTTCCAACACTACCGTGGATTTGTTGCTGAATCTCTCATCACCAAAGAAGGAAGCAAATAAGAATAACAACAATGGTGCTGTTGCTGAGAACCACTCATCTCCTAATAATAATAAGGAGAAGAATCTTCTTCCTTCTGATCCTGCCAAGCCTCCTGCTAAGGCTCAAGTGGTGGGATGGCCACCAGTGAGGTCATACAGGAAGATCATGTTTGCAGTTCAAAAAAGCAGCACAGAAGAGAGTCAGAAGAATGAGAAGAATAACAATAATGGAAATGGTAATGGAAGCTTTGTGAAGGTAAGCATGGATGGTGCACCCTACCTTCGCAAAGTGGACTTGAAGAACTACAACAGTTACCCTCAGCTCTCTGATGCCTTAGGCAAAATGTTTAGCTCTTTCACTATTGGAAGTTGTGAATCAGAAGGAATGAAGGATTTCTTCATGAATGAGAGAGCTTTGATGGATTTATTGAACAATTCTGATTATGTCCCAACTTATGAAGATAAGGATGGAGATTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTTGTGGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAAGAAGCAATTGGACTGGCACCTAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG 786 0.4211 MEKMVFEETELRLGLPGNNKKKNNEKKRGFSETESETESDENNNSDETSNTTVDLLLNLSSPKKEANKNNNNGAVAENHSSPNNNKEKNLLPSDPAKPPAKAQVVGWPPVRSYRKIMFAVQKSSTEESQKNEKNNNNGNGNGSFVKVSMDGAPYLRKVDLKNYNSYPQLSDALGKMFSSFTIGSCESEGMKDFFMNERALMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0680 261 ProSiteProfiles PB1 domain profile. 142 243 IPR000270 GO:0005515
Ahy2g0680 261 SUPERFAMILY CAD & PB1 domains 134 242 - -
Ahy2g0680 261 Pfam AUX/IAA family 8 252 IPR033389 -
Ahy2g0680 261 MobiDBLite consensus disorder prediction 1 106 - -
Ahy2g0680 261 MobiDBLite consensus disorder prediction 121 143 - -
Ahy2g0680 261 MobiDBLite consensus disorder prediction 19 35 - -
Ahy2g0680 261 Gene3D - 134 255 - -
Ahy2g0680 261 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 254 IPR003311 GO:0005634|GO:0006355
Ahy2g0680 261 MobiDBLite consensus disorder prediction 44 90 - -
Ahy2g0680 261 PANTHER AUXIN-INDUCED PROTEIN AUX28 3 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0680 Ahy-Chr2 11191915 11198594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0680 113 241 B3 DNA Binding Superfamily AT5G37020 28.682 5.53e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy2g0680 AUX_IAA 5.30E-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0680 K14484 - gmx:100803065 289.656