Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0659 ATGTTCCCAGCAGTTATGTCCAATTCTACTTCTTTGTCTGAAGAAGCAAGTGTCTCTTCTGGCACAAGAATTCAAGACTTTGGTGCTACCTTAAACCATGTTGTTTCAACAATTTCTCCTCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACCTCCTCAAAAGATCAAGAAAAAGAGAAGCCTCCCTGGAAATCCAGACCCAGATGCTGAAGTGATAGCTTTATCACCAAAGACACTATTAGCAACAAATAGGTTTGTGTGTGAGATCTGTAACAAAGGGTTCCAAAGGGATCAAAACCTTCAGCTTCATAGAAGAGGGCACAATCTACCATGGAAGCTGAAGCAAAGGAACAACAAGGAAGTGAAGAAGAGAGCATATGTTTGCCCTGAACCTTCATGTGTCCATCACAATCCTTCAAGGGCTCTTGGGGACCTCACTGGAATCAAGAAGCATTATTGTAGAAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAGATCTATGCTGTTCAATCTGATTGGAAGGCTCATTCTAAAACTTGTGGTACTAGAGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGACAGCTTCATAACTCATAGGGCATTCTGTGATGCATTGGCTGAAGAGAGTGCAAGAGTTTCAGCAAACCAGCATCAATTAATCACAACACCTTCAAATCCATTACTCCAATCCCTCTTCCTTTTCCCAACCCAAAACAACTTCATCAATCCATGGGACCCACAATCATCTCAAGAAAACCCTAACCCTAATAATAATAATACACTTCTTCATAACATCAACATTAAGCCTGAAGTTCAAAACTTTCACATCCCAAATTCCGATAATGCCCCTCCATTGTTCCTTCACCAAAACCCCAGCAAGAATAACACCATCATGATGACGTCACCCTTCAGGAACAACCCGCACGTGCGCATGCAACCACAATCCAACAGTGCTAATAATGCTGCTGCTGCTGCCACGTCAGCACATCTCTCAGCCACTGCACTCCTCCAGAAGGCCGCGACGGTGGGCGCGGCCGCCATCACGGGCCCTAATGCCTCACTTGGAGTTGGCCAGCACGTGACTCGTCACGTGACTGAGCTTGGCGACATGACTCAGCTTGACTCGGTTCATTTCATGAACAACATGGGAGTGGGAGGGTTTAACAACAACACAAGGAGCCTCAAGAGTAGTGATGATCTTACAAGAGACTTTCTAGGGTTAACCGGAGATAACAACGGCGGAAGAGGCGGCAGCTGTGACGGAGGAAATGCTGGCGCAGTTGACGTTAGCATGAACGTGAAGGACATGCTAACGTACACCGGAAACATAGATTACCAACAACAACACCACCATCATCTTCGACACCCGTTGTTTAAGTCACCACAACAAGGTTTTGGATTTCTTGGAACAACAACTGCCCCAGAATCATGGGGCAATTGTTGA 1488 0.4483 MFPAVMSNSTSLSEEASVSSGTRIQDFGATLNHVVSTISPQQQQQQQQQQQQQQQQQQPPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARVSANQHQLITTPSNPLLQSLFLFPTQNNFINPWDPQSSQENPNPNNNNTLLHNINIKPEVQNFHIPNSDNAPPLFLHQNPSKNNTIMMTSPFRNNPHVRMQPQSNSANNAAAAATSAHLSATALLQKAATVGAAAITGPNASLGVGQHVTRHVTELGDMTQLDSVHFMNNMGVGGFNNNTRSLKSSDDLTRDFLGLTGDNNGGRGGSCDGGNAGAVDVSMNVKDMLTYTGNIDYQQQHHHHLRHPLFKSPQQGFGFLGTTTAPESWGNC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0659 495 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 115 IPR013087 -
Ahy2g0659 495 MobiDBLite consensus disorder prediction 1 78 - -
Ahy2g0659 495 SUPERFAMILY beta-beta-alpha zinc fingers 92 189 IPR036236 -
Ahy2g0659 495 MobiDBLite consensus disorder prediction 1 63 - -
Ahy2g0659 495 Pfam Zinc finger, C2H2 type 93 115 IPR013087 -
Ahy2g0659 495 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Ahy2g0659 495 SMART c2h2final6 93 115 IPR013087 -
Ahy2g0659 495 SMART c2h2final6 134 164 IPR013087 -
Ahy2g0659 495 SMART c2h2final6 169 189 IPR013087 -
Ahy2g0659 495 Gene3D Classic Zinc Finger 71 141 - -
Ahy2g0659 495 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 471 - -
Ahy2g0659 495 Gene3D Classic Zinc Finger 162 232 - -
Ahy2g0659 495 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 8 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0659 Ahy-Chr2 10611067 10617255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0659 15 460 IDZ Gene Family AT4G02670 47.495 5.74e-125 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy2g0659 zf-C2H2 0.005 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0659 K25870 - gmx:100780056 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0788 12 14019266 14025531 Ahy2g0659 2 10611067 10617255 hybridization